RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 NUTM2AQ8IVF1 878 aaPredicted RBP16.5■□□□□ 0.23
SYNRG-225ENST00000619541 MYD88Q99836 296 aa16.5■□□□□ 0.23
SYNRG-225ENST00000619541 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
SYNRG-225ENST00000619541 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
SYNRG-225ENST00000619541 BMP6P22004 513 aa16.5■□□□□ 0.23
SYNRG-225ENST00000619541 AFMP43652 599 aa16.5■□□□□ 0.23
SYNRG-225ENST00000619541 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
SYNRG-225ENST00000619541 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
SYNRG-225ENST00000619541 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 IL2RBP14784 551 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 ZEB2O60315 1214 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 TIMM10P62072 90 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 GNGT1P63211 74 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 TBX2Q13207 712 aaPredicted RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
SYNRG-225ENST00000619541 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
SYNRG-225ENST00000619541 ECM2O94769 699 aaPredicted RBP16.48■□□□□ 0.23
SYNRG-225ENST00000619541 SYF2O95926 243 aaKnown RBP16.48■□□□□ 0.23
SYNRG-225ENST00000619541 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 MICU3Q86XE3 530 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 MATR3P43243 847 aaKnown RBP eCLIP16.48■□□□□ 0.23
SYNRG-225ENST00000619541 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
SYNRG-225ENST00000619541 DACH1Q9UI36 760 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 C5P01031 1676 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
SYNRG-225ENST00000619541 CDC25AP30304 524 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 POSTNQ15063 836 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
SYNRG-225ENST00000619541 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 ATP5J2-PTCD1G3V325 749 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
SYNRG-225ENST00000619541 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 SMYD4Q8IYR2 804 aaPredicted RBP16.47■□□□□ 0.23
SYNRG-225ENST00000619541 OTUD6BQ8N6M0 293 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 KBTBD3Q8NAB2 608 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 MYO1FO00160 1098 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 KRT40Q6A162 431 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 TFR2Q9UP52 801 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 NDUFAB1O14561 156 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 RUFY1Q96T51 708 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 CAPS2Q9BXY5 557 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 PAG1Q9NWQ8 432 aa16.47■□□□□ 0.23
SYNRG-225ENST00000619541 SALL1Q9NSC2 1324 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 GOLGA6BA6NDN3 693 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 CASP1P29466 404 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 MMP14P50281 582 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 IRAK1P51617 712 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 ABCC6O95255 1503 aa16.46■□□□□ 0.23
SYNRG-225ENST00000619541 NBPF26B4DH59 902 aa16.46■□□□□ 0.22
SYNRG-225ENST00000619541 ATP1A2P50993 1020 aa16.46■□□□□ 0.22
SYNRG-225ENST00000619541 NBPF14Q5TI25 921 aa16.46■□□□□ 0.22
SYNRG-225ENST00000619541 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.22
SYNRG-225ENST00000619541 NBPF15Q8N660 670 aa16.46■□□□□ 0.22
SYNRG-225ENST00000619541 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.22
SYNRG-225ENST00000619541 VPS16Q9H269 839 aa16.46■□□□□ 0.22
SYNRG-225ENST00000619541 N4BP3O15049 544 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 A1BGP04217 495 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 GCKRQ14397 625 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYNRG-225ENST00000619541 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
SYNRG-225ENST00000619541 CPLX2Q6PUV4 134 aaKnown RBP16.45■□□□□ 0.22
SYNRG-225ENST00000619541 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
SYNRG-225ENST00000619541 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYNRG-225ENST00000619541 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 STAMQ92783 540 aa16.45■□□□□ 0.22
SYNRG-225ENST00000619541 MRC1P22897 1456 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 CDHR2Q9BYE9 1310 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 GRIN1Q05586 938 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 PKD1L3Q7Z443 1732 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
SYNRG-225ENST00000619541 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
SYNRG-225ENST00000619541 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 MMS19Q96T76 1030 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 HAUS7Q99871 368 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 CD248Q9HCU0 757 aa16.44■□□□□ 0.22
SYNRG-225ENST00000619541 KCTD16Q68DU8 428 aa16.43■□□□□ 0.22
SYNRG-225ENST00000619541 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
SYNRG-225ENST00000619541 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
SYNRG-225ENST00000619541 FRMD3A2A2Y4 597 aa16.43■□□□□ 0.22
SYNRG-225ENST00000619541 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
SYNRG-225ENST00000619541 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms