RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 CTGFP29279 349 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 ADD2P35612 726 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 FCGRTP55899 365 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 BACE1P56817 501 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 JAG1P78504 1218 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 TATDN1Q6P1N9 297 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 GPATCH3Q96I76 525 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 ZNF333Q96JL9 665 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 ECHDC1Q9NTX5 307 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 LOC285556D6RIA3 1793 aa30.48■■■□□ 2.47
VEGFA-228ENST00000617771 OSBPP22059 807 aa30.47■■■□□ 2.47
VEGFA-228ENST00000617771 MTMR2Q13614 643 aa30.47■■■□□ 2.47
VEGFA-228ENST00000617771 TMOD4Q9NZQ9 345 aa30.47■■■□□ 2.47
VEGFA-228ENST00000617771 C19orf81C9J6K1 198 aa30.46■■■□□ 2.47
VEGFA-228ENST00000617771 LCORLQ8N3X6 602 aa30.46■■■□□ 2.47
VEGFA-228ENST00000617771 USP17L10C9JJH3 530 aa30.45■■■□□ 2.47
VEGFA-228ENST00000617771 SHROOM1Q2M3G4 852 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-228ENST00000617771 ZSCAN25Q6NSZ9 544 aa30.45■■■□□ 2.47
VEGFA-228ENST00000617771 MCM9Q9NXL9 1143 aa30.45■■■□□ 2.47
VEGFA-228ENST00000617771 PCDHB15Q9Y5E8 787 aa30.45■■■□□ 2.47
VEGFA-228ENST00000617771 MYPNQ86TC9 1320 aa30.45■■■□□ 2.46
VEGFA-228ENST00000617771 GH2P01242 217 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 PLCD1P51178 756 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 CERKLQ49MI3 558 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-228ENST00000617771 RAET1EQ8TD07 263 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 SDR42E1Q8WUS8 393 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 TMEM106CQ9BVX2 250 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 ARMT1Q9H993 441 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 DDX60LQ5H9U9 1706 aaKnown RBP30.44■■■□□ 2.46
VEGFA-228ENST00000617771 NAV1Q8NEY1 1877 aa30.44■■■□□ 2.46
VEGFA-228ENST00000617771 POTEFA5A3E0 1075 aa30.43■■■□□ 2.46
VEGFA-228ENST00000617771 GCLCP48506 637 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-228ENST00000617771 UBE3CQ15386 1083 aa30.43■■■□□ 2.46
VEGFA-228ENST00000617771 ANKRD13CQ8N6S4 541 aa30.43■■■□□ 2.46
VEGFA-228ENST00000617771 DCP1AQ9NPI6 582 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-228ENST00000617771 MBD4O95243 580 aa30.42■■■□□ 2.46
VEGFA-228ENST00000617771 FAM110CQ1W6H9 321 aa30.42■■■□□ 2.46
VEGFA-228ENST00000617771 SH3TC2Q8TF17 1288 aa30.42■■■□□ 2.46
VEGFA-228ENST00000617771 ASCC2Q9H1I8 757 aaPredicted RBP30.42■■■□□ 2.46
VEGFA-228ENST00000617771 CABP5Q9NP86 173 aa30.42■■■□□ 2.46
VEGFA-228ENST00000617771 ABCB5Q2M3G0 1257 aa30.41■■■□□ 2.46
VEGFA-228ENST00000617771 ATP8A2Q9NTI2 1148 aa30.41■■■□□ 2.46
VEGFA-228ENST00000617771 SHMT1P34896 483 aa30.4■■■□□ 2.46
VEGFA-228ENST00000617771 IRX3P78415 501 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-228ENST00000617771 PRKCZQ05513 592 aa30.4■■■□□ 2.46
VEGFA-228ENST00000617771 RAB3GAP1Q15042 981 aa30.4■■■□□ 2.46
VEGFA-228ENST00000617771 SLFNL1Q499Z3 407 aa30.4■■■□□ 2.46
VEGFA-228ENST00000617771 RBBP6Q7Z6E9 1792 aaKnown RBP30.39■■■□□ 2.46
VEGFA-228ENST00000617771 TNPO2O14787 897 aaKnown RBP30.39■■■□□ 2.46
VEGFA-228ENST00000617771 HOXA7P31268 230 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-228ENST00000617771 GABPAQ06546 454 aa30.39■■■□□ 2.46
VEGFA-228ENST00000617771 USP17L2Q6R6M4 530 aa30.39■■■□□ 2.46
VEGFA-228ENST00000617771 TAOK2Q9UL54 1235 aa30.39■■■□□ 2.46
VEGFA-228ENST00000617771 GRK4P32298 578 aa30.38■■■□□ 2.45
VEGFA-228ENST00000617771 DDRGK1Q96HY6 314 aa30.38■■■□□ 2.45
VEGFA-228ENST00000617771 CRBNQ96SW2 442 aa30.38■■■□□ 2.45
VEGFA-228ENST00000617771 FEZ1Q99689 392 aa30.38■■■□□ 2.45
VEGFA-228ENST00000617771 CENPFP49454 3210 aa30.37■■■□□ 2.45
VEGFA-228ENST00000617771 AMOTL1Q8IY63 956 aa30.37■■■□□ 2.45
VEGFA-228ENST00000617771 MGAMO43451 1857 aa30.37■■■□□ 2.45
VEGFA-228ENST00000617771 PRKAB2O43741 272 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 KBTBD3Q8NAB2 608 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 COA7Q96BR5 231 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 EMILIN3Q9NT22 766 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 SWAP70Q9UH65 585 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 GABRQQ9UN88 632 aa30.36■■■□□ 2.45
VEGFA-228ENST00000617771 MYCP01106 439 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-228ENST00000617771 CHGBP05060 677 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 USP14P54578 494 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 TSHZ3Q63HK5 1081 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 SLAIN1Q8ND83 568 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 TTC41PQ6P2S7 1318 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 MYH7P12883 1935 aa30.35■■■□□ 2.45
VEGFA-228ENST00000617771 CYP2D6P10635 497 aa30.34■■■□□ 2.45
VEGFA-228ENST00000617771 EN2P19622 333 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-228ENST00000617771 C12orf42Q96LP6 360 aa30.34■■■□□ 2.45
VEGFA-228ENST00000617771 PUS7LQ9H0K6 701 aaKnown RBP30.34■■■□□ 2.45
VEGFA-228ENST00000617771 SLC4A4Q9Y6R1 1079 aa30.34■■■□□ 2.45
VEGFA-228ENST00000617771 TNRC18O15417 2968 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-228ENST00000617771 ERC2O15083 957 aa30.33■■■□□ 2.45
VEGFA-228ENST00000617771 FLT3LGP49771 235 aa30.33■■■□□ 2.45
VEGFA-228ENST00000617771 EVX2Q03828 476 aa30.33■■■□□ 2.45
VEGFA-228ENST00000617771 ZYXQ15942 572 aaKnown RBP30.33■■■□□ 2.45
VEGFA-228ENST00000617771 P2RX7Q99572 595 aaKnown RBP30.33■■■□□ 2.45
VEGFA-228ENST00000617771 KIAA1683Q9H0B3 1180 aa30.33■■■□□ 2.45
VEGFA-228ENST00000617771 MORF4L1Q9UBU8 362 aa30.33■■■□□ 2.45
VEGFA-228ENST00000617771 BIN2Q9UBW5 565 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-228ENST00000617771 ZBTB47Q9UFB7 747 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-228ENST00000617771 MPHOSPH10O00566 681 aaKnown RBP30.32■■■□□ 2.44
VEGFA-228ENST00000617771 HERVK_113P62684 666 aa30.32■■■□□ 2.44
VEGFA-228ENST00000617771 UBXN2AP68543 259 aa30.32■■■□□ 2.44
VEGFA-228ENST00000617771 GTF3C2Q8WUA4 911 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-228ENST00000617771 IRF5Q13568 498 aa30.31■■■□□ 2.44
VEGFA-228ENST00000617771 LRRFIP1Q32MZ4 808 aaKnown RBP30.31■■■□□ 2.44
VEGFA-228ENST00000617771 ADCY3O60266 1144 aa30.3■■■□□ 2.44
VEGFA-228ENST00000617771 ZFYP08048 801 aaPredicted RBP30.3■■■□□ 2.44
VEGFA-228ENST00000617771 SEPT2Q15019 361 aa30.3■■■□□ 2.44
VEGFA-228ENST00000617771 C12orf60Q5U649 245 aa30.3■■■□□ 2.44
VEGFA-228ENST00000617771 ACER1Q8TDN7 264 aa30.3■■■□□ 2.44
VEGFA-228ENST00000617771 APPBP2Q92624 585 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms