RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 ABCC12Q96J65 1359 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 CDHR2Q9BYE9 1310 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 UVSSAQ2YD98 709 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 TXNRD3Q86VQ6 643 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 FMNL3Q8IVF7 1028 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 PLA2G12BQ9BX93 195 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 GPR108Q9NPR9 543 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 RTCBQ9Y3I0 505 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 BCL9LQ86UU0 1499 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 AKAP11Q9UKA4 1901 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 CPLX1O14810 134 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 CYP7A1P22680 504 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ELF1P32519 619 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ACTN2P35609 894 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ADD1P35611 737 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ADD2P35612 726 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 NAP1L1P55209 391 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 CORO7P57737 925 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 DYNLL1P63167 89 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 KRT32Q14532 448 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ZRSR2Q15696 482 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 TBC1D25Q3MII6 688 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 TTC6Q86TZ1 520 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ZNF483Q8TF39 744 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 JPH2Q9BR39 696 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 NAPBQ9H115 298 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 GNL3LQ9NVN8 582 aaKnown RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ANKIB1Q9P2G1 1089 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 ZNF219Q9P2Y4 722 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-214ENST00000617767 SLC4A4Q9Y6R1 1079 aa6.35□□□□□ -1.39
CPNE4-214ENST00000617767 OATP04181 439 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 ADRA2BP18089 450 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 OAS2P29728 719 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 TRAF1Q13077 416 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 ANKRD1Q15327 319 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 CYB5R4Q7L1T6 521 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 REXO1L1PQ8IX06 675 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 BICD2Q8TD16 824 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 NUP133Q8WUM0 1156 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 N4BP2L2Q92802 583 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 SMARCC1Q92922 1105 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 SH3GL3Q99963 347 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 TRIM6Q9C030 488 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 LRRC4BQ9NT99 713 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 AHDC1Q5TGY3 1603 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 NEDD4P46934 1319 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 CCP110O43303 1012 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 NRDCO43847 1150 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 CTDNEP1O95476 244 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 PDIA3P30101 505 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 CLCN6P51797 869 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 RWDD2BP57060 319 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 VPS72Q15906 364 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 LEKR1Q6ZMV7 388 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 BARGINQ6ZT62 677 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 TEX11Q8IYF3 940 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 DSCC1Q9BVC3 393 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 C21orf2O43822 256 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 ERCC3P19447 782 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 MAP3K12Q12852 859 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 ZRSR1Q15695 479 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 LRRC31Q6UY01 552 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 RPUSD2Q8IZ73 545 aaKnown RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-214ENST00000617767 NLRP3Q96P20 1036 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
CPNE4-214ENST00000617767 BAZ2AQ9UIF9 1905 aaKnown RBP6.34□□□□□ -1.4
CPNE4-214ENST00000617767 MROH5Q6ZUA9 1318 aa6.34□□□□□ -1.4
CPNE4-214ENST00000617767 PPFIA2O75334 1257 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 PYGLP06737 847 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 IVLP07476 585 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 IBSPP21815 317 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 HNRNPH1P31943 449 aaKnown RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 RPS6KA3P51812 740 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ANTXR2P58335 489 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 NFIXQ14938 502 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TPD52L1Q16890 204 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 FAM177A1Q8N128 213 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 NSUN7Q8NE18 718 aaKnown RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 CTCFLQ8NI51 663 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ZNF396Q96N95 335 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 CDC5LQ99459 802 aaKnown RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TSPYL2Q9H2G4 693 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 EPB41L4AQ9HCS5 686 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 AATFQ9NY61 560 aaKnown RBP eCLIP6.33□□□□□ -1.4
CPNE4-214ENST00000617767 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 MYH7P12883 1935 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 CPP00450 1065 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 PTGS1P23219 599 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 KRT85P78386 507 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 TADA2BQ86TJ2 420 aa6.33□□□□□ -1.4
CPNE4-214ENST00000617767 ARL10Q8N8L6 244 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms