RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TRPC3Q13507 836 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 VCXQ9H320 206 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 USH1CQ9Y6N9 552 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 ZNF202O95125 648 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 ITGA6P23229 1130 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 DMTNQ08495 405 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 LPIN2Q92539 896 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 CCNT1O60563 726 aaKnown RBP19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 UTP14CQ5TAP6 766 aaKnown RBP19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 GKAP1Q5VSY0 366 aaPredicted RBP19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 DPH6Q7L8W6 267 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 XAGE2Q96GT9 111 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 POSTNQ15063 836 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 GPAA1O43292 621 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 SRGAP1Q7Z6B7 1085 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 RXRAP19793 462 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 HELBQ8NG08 1087 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 VTI1AQ96AJ9 217 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 POLD1P28340 1107 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 MAGEA1P43355 309 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 ITIH3Q06033 890 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 BRDTQ58F21 947 aaPredicted RBP19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 ZNF790Q6PG37 636 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 PLIN2Q99541 437 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 NT5C3AQ9H0P0 336 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 YWHAEP62258 255 aaKnown RBP19.34■□□□□ 0.69
HMGXB3-206ENST00000613459 CHL1O00533 1208 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 TAF12Q16514 161 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 CCDC62Q6P9F0 684 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 IWS1Q96ST2 819 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 DNM3Q9UQ16 869 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 SETSIPP0DME0 302 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 V9GY48 417 aaPredicted RBP19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 MAP3K19Q56UN5 1328 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 KDM3AQ9Y4C1 1321 aa19.33■□□□□ 0.69
HMGXB3-206ENST00000613459 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 ZNF500O60304 480 aaPredicted RBP19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 PHLDB2Q86SQ0 1253 aa19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 RAB17Q9H0T7 212 aa19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 BCAP29Q9UHQ4 241 aa19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 CRCPO75575 148 aa19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.68
HMGXB3-206ENST00000613459 MCUR1Q96AQ8 359 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 ZBTB21Q9ULJ3 1066 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 TRAPPC3LQ5T215 181 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 UAP1Q16222 522 aaPredicted RBP19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 WHAMMP3Q1A5X7 153 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 SFMBT2Q5VUG0 894 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 CNGA1P29973 690 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 BRD3Q15059 726 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 SNX29Q8TEQ0 813 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 WWC3Q9ULE0 1092 aa19.32■□□□□ 0.68
HMGXB3-206ENST00000613459 RPS6KA1Q15418 735 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 KRT24Q2M2I5 525 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 ARMT1Q9H993 441 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 IL13P35225 146 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 NFE2L3Q9Y4A8 694 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 CTTNBP2Q8WZ74 1663 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 CCDC169A6NNP5 214 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 KRT9P35527 623 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 KRT40Q6A162 431 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 CTTNBP2NLQ9P2B4 639 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 GGA1Q9UJY5 639 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 P3H4Q92791 437 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 CABS1Q96KC9 395 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 GPCPD1Q9NPB8 672 aa19.31■□□□□ 0.68
HMGXB3-206ENST00000613459 HHATQ5VTY9 493 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 SPATS2Q86XZ4 545 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 TRIML1Q8N9V2 468 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 PICK1Q9NRD5 415 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 I3L4J1 428 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 KLHL30Q0D2K2 578 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 TBC1D22AQ8WUA7 517 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 HMGB1P1B2RPK0 211 aaPredicted RBP19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 TXKP42681 527 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 ZNF131P52739 623 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 C17orf53Q8N3J3 647 aaPredicted RBP19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 TBC1D31Q96DN5 1066 aa19.3■□□□□ 0.68
HMGXB3-206ENST00000613459 CFAP43Q8NDM7 1665 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 TRIM37O94972 964 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 CALCRLQ16602 461 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 VSIG1Q86XK7 387 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 UFL1O94874 794 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 CABP7Q86V35 215 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 ATP5JP18859 108 aa19.29■□□□□ 0.68
HMGXB3-206ENST00000613459 ZNF274Q96GC6 653 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms