RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 P2RX7Q99572 595 aaKnown RBP20.5■□□□□ 0.87
TVP23A-210ENST00000612195 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
TVP23A-210ENST00000612195 MORF4L1Q9UBU8 362 aa20.5■□□□□ 0.87
TVP23A-210ENST00000612195 SAP30BPQ9UHR5 308 aaKnown RBP20.5■□□□□ 0.87
TVP23A-210ENST00000612195 FOCADQ5VW36 1801 aa20.5■□□□□ 0.87
TVP23A-210ENST00000612195 PEX10O60683 326 aa20.49■□□□□ 0.87
TVP23A-210ENST00000612195 GDF11O95390 407 aa20.49■□□□□ 0.87
TVP23A-210ENST00000612195 HMGCRP04035 888 aa20.49■□□□□ 0.87
TVP23A-210ENST00000612195 HOXA7P31268 230 aaPredicted RBP20.49■□□□□ 0.87
TVP23A-210ENST00000612195 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
TVP23A-210ENST00000612195 IRX3P78415 501 aaPredicted RBP20.49■□□□□ 0.87
TVP23A-210ENST00000612195 TRIM32Q13049 653 aa20.49■□□□□ 0.87
TVP23A-210ENST00000612195 TRIM34Q9BYJ4 488 aa20.49■□□□□ 0.87
TVP23A-210ENST00000612195 DBNLQ9UJU6 430 aaKnown RBP20.49■□□□□ 0.87
TVP23A-210ENST00000612195 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
TVP23A-210ENST00000612195 CCDC8Q9H0W5 538 aaPredicted RBP20.48■□□□□ 0.87
TVP23A-210ENST00000612195 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
TVP23A-210ENST00000612195 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
TVP23A-210ENST00000612195 PLXNB2O15031 1838 aa20.48■□□□□ 0.87
TVP23A-210ENST00000612195 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
TVP23A-210ENST00000612195 C19orf81C9J6K1 198 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 HERVK_113P62684 666 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 NECAB2Q7Z6G3 386 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
TVP23A-210ENST00000612195 TXNRD2Q9NNW7 524 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 HMX1Q9NP08 348 aaPredicted RBP20.47■□□□□ 0.87
TVP23A-210ENST00000612195 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
TVP23A-210ENST00000612195 IGSF3O75054 1194 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 CYP2B6P20813 491 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 CYP7A1P22680 504 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
TVP23A-210ENST00000612195 GPRC5AQ8NFJ5 357 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 ALPK3Q96L96 1907 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 RPTORQ8N122 1335 aa20.46■□□□□ 0.87
TVP23A-210ENST00000612195 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
TVP23A-210ENST00000612195 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 RLBP1P12271 317 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 TRIB2Q92519 343 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 EMILIN3Q9NT22 766 aa20.45■□□□□ 0.86
TVP23A-210ENST00000612195 ANKLE1Q8NAG6 615 aa20.44■□□□□ 0.86
TVP23A-210ENST00000612195 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
TVP23A-210ENST00000612195 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
TVP23A-210ENST00000612195 MYH1P12882 1939 aa20.44■□□□□ 0.86
TVP23A-210ENST00000612195 DNAH12Q6ZR08 3092 aa20.44■□□□□ 0.86
TVP23A-210ENST00000612195 GH2P01242 217 aa20.43■□□□□ 0.86
TVP23A-210ENST00000612195 Q3C1V9 767 aa20.43■□□□□ 0.86
TVP23A-210ENST00000612195 MAGEB6Q8N7X4 407 aa20.43■□□□□ 0.86
TVP23A-210ENST00000612195 NUDT12Q9BQG2 462 aa20.43■□□□□ 0.86
TVP23A-210ENST00000612195 USP5P45974 858 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
TVP23A-210ENST00000612195 MAP3K21Q5TCX8 1036 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 POTEEQ6S8J3 1075 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 PAGR1Q9BTK6 254 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 NBPF3Q9H094 633 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 PORCNQ9H237 461 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
TVP23A-210ENST00000612195 COL6A3P12111 3177 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 A0A1W2PPC1 479 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
TVP23A-210ENST00000612195 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
TVP23A-210ENST00000612195 MAPK4P31152 587 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 ERVK-24P63145 666 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 TATDN1Q6P1N9 297 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 SOCS4Q8WXH5 440 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 OGDHLQ9ULD0 1010 aa20.41■□□□□ 0.86
TVP23A-210ENST00000612195 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
TVP23A-210ENST00000612195 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 CERS3Q8IU89 383 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 CCAR1Q8IX12 1150 aaKnown RBP20.4■□□□□ 0.86
TVP23A-210ENST00000612195 C7orf61Q8IZ16 206 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 USP6NLQ92738 828 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 SERPINB13Q9UIV8 391 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
TVP23A-210ENST00000612195 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
TVP23A-210ENST00000612195 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 ZYXQ15942 572 aaKnown RBP20.39■□□□□ 0.85
TVP23A-210ENST00000612195 MORN1Q5T089 497 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 GPR142Q7Z601 462 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 GTF3C2Q8WUA4 911 aaPredicted RBP20.39■□□□□ 0.85
TVP23A-210ENST00000612195 EHD4Q9H223 541 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 C11orf49Q9H6J7 331 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.85
TVP23A-210ENST00000612195 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-210ENST00000612195 ZKSCAN1P17029 563 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-210ENST00000612195 CACNB2Q08289 660 aaPredicted RBP20.38■□□□□ 0.85
TVP23A-210ENST00000612195 RAB3GAP1Q15042 981 aa20.38■□□□□ 0.85
TVP23A-210ENST00000612195 PLEKHH3Q7Z736 793 aa20.38■□□□□ 0.85
TVP23A-210ENST00000612195 AACSQ86V21 672 aa20.38■□□□□ 0.85
TVP23A-210ENST00000612195 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
TVP23A-210ENST00000612195 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
TVP23A-210ENST00000612195 FEZ1Q99689 392 aa20.38■□□□□ 0.85
TVP23A-210ENST00000612195 ZMYND8Q9ULU4 1186 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms