RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	RPSA	P08865	295 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RNASE9	P60153	205 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ARFGAP2	Q8N6H7	521 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GFM2	Q969S9	779 aa	Known RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	OPTN	Q96CV9	577 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NLRP2	Q9NX02	1062 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	DNAI1	Q9UI46	699 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC88C	Q9P219	2028 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZFX	P17010	805 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SZRD1	Q7Z422	152 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PARD3B	Q8TEW8	1205 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRPC5	Q9UL62	973 aa	Predicted RBP	4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ATP8A1	Q9Y2Q0	1164 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MAD1L1	Q9Y6D9	718 aa		4.54	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZNF521	Q96K83	1311 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TPR	P12270	2363 aa	Known RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TBC1D8	O95759	1140 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IRX4	P78413	519 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ARHGAP4	P98171	946 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IDI1	Q13907	227 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NBPF10	Q6P3W6	841 aa	Known RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TSGA10	Q9BZW7	698 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UTP11	Q9Y3A2	253 aa	Known RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SAT1	P21673	171 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRAPPC10	P48553	1259 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	MCCD1	P59942	119 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC183	Q5T5S1	534 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	LZTFL1	Q9NQ48	299 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TULP4	Q9NRJ4	1543 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GRAMD4	Q6IC98	578 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT74	Q7RTS7	529 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	AACS	Q86V21	672 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PPP4R1	Q8TF05	950 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CD163L1	Q9NR16	1453 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT87P	A6NCN2	255 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KCNA4	P22459	653 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UBASH3A	P57075	661 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NRBF2	Q96F24	287 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZFYVE19	Q96K21	471 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	FAM204A	Q9H8W3	233 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SMYD2	Q9NRG4	433 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	DNAJC13	O75165	2243 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	LVRN	Q6Q4G3	990 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ANGPTL8	Q6UXH0	198 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CEP70	Q8NHQ1	597 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CTCFL	Q8NI51	663 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NRXN3	Q9Y4C0	1643 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GOLGA6C	A6NDK9	693 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PRR23D1	E9PI22	279 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GOLGA6D	P0CG33	693 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CYB5RL	Q6IPT4	315 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	POLE3	Q9NRF9	147 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GOLGA6A	Q9NYA3	693 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SUGT1	Q9Y2Z0	365 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SLC12A7	Q9Y666	1083 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PPIP5K1	Q6PFW1	1433 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT86	O43790	486 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PRDM1	O75626	825 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT5	P13647	590 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	KRT17	Q04695	432 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NEUROG2	Q9H2A3	272 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	EHMT1	Q9H9B1	1298 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	EPS15L1	Q9UBC2	864 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SYNDIG1L	A6NDD5	238 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624		H3BRJ5	948 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	APAF1	O14727	1248 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	UBA7	P41226	1012 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRIM59	Q8IWR1	403 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PLCB1	Q9NQ66	1216 aa		4.53	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RHOBTB1	O94844	696 aa		4.53	□□□□□ -1.69
KCNMA1-223	ENST00000604624	NONO	Q15233	471 aa	Known RBP eCLIP	4.53	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ERMN	Q8TAM6	284 aa		4.53	□□□□□ -1.69
KCNMA1-223	ENST00000604624	TRIM31	Q9BZY9	425 aa		4.53	□□□□□ -1.69
KCNMA1-223	ENST00000604624	USP54	Q70EL1	1684 aa		4.53	□□□□□ -1.69
KCNMA1-223	ENST00000604624	PPFIA3	O75145	1194 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	CLTA	P09496	248 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	NEK2	P51955	445 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	SLC8A3	P57103	927 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ESRRG	P62508	458 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	NAPB	Q9H115	298 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	MAP1B	P46821	2468 aa	Known RBP	4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	RIMS2	Q9UQ26	1411 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	DOCK10	Q96BY6	2186 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	LRRD1	A4D1F6	860 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ARHGDIA	P52565	204 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ABHD8	Q96I13	439 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ZNF830	Q96NB3	372 aa	Predicted RBP	4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	BCAP29	Q9UHQ4	241 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	ADGRF5	Q8IZF2	1346 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624		A0A087WZG4	1122 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	NBPF20	Q3BBV1	942 aa		4.52	□□□□□ -1.69
KCNMA1-223	ENST00000604624	MYLK4	Q86YV6	388 aa	Predicted RBP	4.52	□□□□□ -1.69

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