RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ORC3Q9UBD5 711 aaPredicted RBP23.36■■□□□ 1.33
PNKP-214ENST00000600573 STK36Q9NRP7 1315 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 IFNAR1P17181 557 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 PTGER2P43116 358 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 TFAP4Q01664 338 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 CAVIN1Q6NZI2 390 aaKnown RBP23.35■■□□□ 1.33
PNKP-214ENST00000600573 USP48Q86UV5 1035 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 FANCBQ8NB91 859 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 DHX36Q9H2U1 1008 aaKnown RBP23.35■■□□□ 1.33
PNKP-214ENST00000600573 SENP2Q9HC62 589 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 SWAP70Q9UH65 585 aa23.35■■□□□ 1.33
PNKP-214ENST00000600573 SAP30BPQ9UHR5 308 aaKnown RBP23.35■■□□□ 1.33
PNKP-214ENST00000600573 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
PNKP-214ENST00000600573 SMIM22K7EJ46 135 aa23.34■■□□□ 1.33
PNKP-214ENST00000600573 HLA-DOAP06340 250 aa23.34■■□□□ 1.33
PNKP-214ENST00000600573 ADD1P35611 737 aaKnown RBP23.34■■□□□ 1.33
PNKP-214ENST00000600573 AGBL3Q8NEM8 1001 aa23.34■■□□□ 1.33
PNKP-214ENST00000600573 MAP3K14Q99558 947 aa23.34■■□□□ 1.33
PNKP-214ENST00000600573 TSPY3P0CV98 308 aa23.33■■□□□ 1.33
PNKP-214ENST00000600573 TSPY8P0CW00 308 aa23.33■■□□□ 1.33
PNKP-214ENST00000600573 FDPSP14324 419 aaKnown RBP23.33■■□□□ 1.33
PNKP-214ENST00000600573 CDK8P49336 464 aa23.33■■□□□ 1.33
PNKP-214ENST00000600573 KRT85P78386 507 aa23.33■■□□□ 1.33
PNKP-214ENST00000600573 DNM1Q05193 864 aaKnown RBP23.33■■□□□ 1.33
PNKP-214ENST00000600573 OSBPL5Q9H0X9 879 aaPredicted RBP23.33■■□□□ 1.33
PNKP-214ENST00000600573 GDPD2Q9HCC8 539 aa23.33■■□□□ 1.33
PNKP-214ENST00000600573 PPP1R1BQ9UD71 204 aaPredicted RBP23.33■■□□□ 1.33
PNKP-214ENST00000600573 FIBPO43427 364 aa23.33■■□□□ 1.32
PNKP-214ENST00000600573 RBM5P52756 815 aaKnown RBP eCLIP23.33■■□□□ 1.32
PNKP-214ENST00000600573 SSRP1Q08945 709 aaKnown RBP23.33■■□□□ 1.32
PNKP-214ENST00000600573 NTRK3Q16288 839 aa23.33■■□□□ 1.32
PNKP-214ENST00000600573 TRIM22Q8IYM9 498 aa23.33■■□□□ 1.32
PNKP-214ENST00000600573 JDP2Q8WYK2 163 aa23.33■■□□□ 1.32
PNKP-214ENST00000600573 DYNLL2Q96FJ2 89 aa23.33■■□□□ 1.32
PNKP-214ENST00000600573 FAM217BQ9NTX9 383 aaPredicted RBP23.33■■□□□ 1.32
PNKP-214ENST00000600573 CDK5RAP2Q96SN8 1893 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 CDC27P30260 824 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 RESTQ13127 1097 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 FAM47AQ5JRC9 791 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 ATL3Q6DD88 541 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 FERMT3Q86UX7 667 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 OGFOD1Q8N543 542 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 NEDD1Q8NHV4 660 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 SYAP1Q96A49 352 aaPredicted RBP23.32■■□□□ 1.32
PNKP-214ENST00000600573 C8orf76Q96K31 380 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 EHD4Q9H223 541 aa23.32■■□□□ 1.32
PNKP-214ENST00000600573 RASA1P20936 1047 aa23.31■■□□□ 1.32
PNKP-214ENST00000600573 PICALMQ13492 652 aa23.31■■□□□ 1.32
PNKP-214ENST00000600573 PPP4R3BQ5MIZ7 849 aa23.31■■□□□ 1.32
PNKP-214ENST00000600573 GMLQ99445 158 aa23.31■■□□□ 1.32
PNKP-214ENST00000600573 FMNL1O95466 1100 aaPredicted RBP23.3■■□□□ 1.32
PNKP-214ENST00000600573 ZNF445P59923 1031 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 UBE2HP62256 183 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 GABPAQ06546 454 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 TROAPQ12815 778 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 TNIP1Q15025 636 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 FBXO18Q8NFZ0 1043 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 SPON1Q9HCB6 807 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 SERPINB13Q9UIV8 391 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
PNKP-214ENST00000600573 PSMD14O00487 310 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 ENTPD3O75355 529 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 CFAP100Q494V2 611 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 NUP133Q8WUM0 1156 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 KAT14Q9H8E8 782 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 DDX4Q9NQI0 724 aaKnown RBP23.3■■□□□ 1.32
PNKP-214ENST00000600573 SCN9AQ15858 1988 aa23.3■■□□□ 1.32
PNKP-214ENST00000600573 FOCADQ5VW36 1801 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 KIF5BP33176 963 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 EVX2Q03828 476 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 ZSCAN23Q3MJ62 389 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 MTMR14Q8NCE2 650 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 CTCFLQ8NI51 663 aaPredicted RBP23.29■■□□□ 1.32
PNKP-214ENST00000600573 MYL10Q9BUA6 226 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 BCS1LQ9Y276 419 aa23.29■■□□□ 1.32
PNKP-214ENST00000600573 ELP1O95163 1332 aa23.28■■□□□ 1.32
PNKP-214ENST00000600573 GADD45BO75293 160 aaPredicted RBP23.28■■□□□ 1.32
PNKP-214ENST00000600573 RAD17O75943 681 aa23.28■■□□□ 1.32
PNKP-214ENST00000600573 RXRAP19793 462 aa23.28■■□□□ 1.32
PNKP-214ENST00000600573 CRACR2BQ8N4Y2 399 aaPredicted RBP23.28■■□□□ 1.32
PNKP-214ENST00000600573 RNF26Q9BY78 433 aaPredicted RBP23.28■■□□□ 1.32
PNKP-214ENST00000600573 SCAND2PQ9GZW5 306 aaPredicted RBP23.28■■□□□ 1.32
PNKP-214ENST00000600573 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
PNKP-214ENST00000600573 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
PNKP-214ENST00000600573 CFAP45Q9UL16 551 aa23.28■■□□□ 1.32
PNKP-214ENST00000600573 ZNF646O15015 1829 aaPredicted RBP23.27■■□□□ 1.32
PNKP-214ENST00000600573 PSME4Q14997 1843 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 DEXIO95424 95 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 GNAQP50148 359 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 TRIM29Q14134 588 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 CIAPIN1Q6FI81 312 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 RCSD1Q6JBY9 416 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 FOXP4Q8IVH2 680 aaPredicted RBP23.27■■□□□ 1.32
PNKP-214ENST00000600573 CCDC144CPQ8IYA2 1237 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 KLHL34Q8N239 644 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 CCDC17Q96LX7 622 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 IL17RBQ9NRM6 502 aa23.27■■□□□ 1.32
PNKP-214ENST00000600573 PI4KBQ9UBF8 816 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms