RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 TRIM34Q9BYJ4 488 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 SPDYE5A6NIY4 337 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 REC8O95072 547 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 FGAP02671 866 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
TRIM28-207ENST00000597136 NOGQ13253 232 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 ERO1BQ86YB8 467 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 JMYQ8N9B5 988 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 NAPBQ9H115 298 aa17.87■□□□□ 0.45
TRIM28-207ENST00000597136 PTPRAP18433 802 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 MAP2K2P36507 400 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 CDK8P49336 464 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 NACAP1Q9BZK3 213 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 INCENPQ9NQS7 918 aa17.86■□□□□ 0.45
TRIM28-207ENST00000597136 ARPP21Q9UBL0 812 aaPredicted RBP17.86■□□□□ 0.45
TRIM28-207ENST00000597136 IRF6O14896 467 aa17.85■□□□□ 0.45
TRIM28-207ENST00000597136 ALX1Q15699 326 aa17.85■□□□□ 0.45
TRIM28-207ENST00000597136 CERKLQ49MI3 558 aaPredicted RBP17.85■□□□□ 0.45
TRIM28-207ENST00000597136 KIAA1211Q6ZU35 1233 aa17.85■□□□□ 0.45
TRIM28-207ENST00000597136 LSG1Q9H089 658 aaKnown RBP17.85■□□□□ 0.45
TRIM28-207ENST00000597136 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
TRIM28-207ENST00000597136 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
TRIM28-207ENST00000597136 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
TRIM28-207ENST00000597136 PTH1RQ03431 593 aa17.84■□□□□ 0.45
TRIM28-207ENST00000597136 CTDSPL2Q05D32 466 aa17.84■□□□□ 0.45
TRIM28-207ENST00000597136 C16orf86Q6ZW13 317 aa17.84■□□□□ 0.45
TRIM28-207ENST00000597136 AMOTL1Q8IY63 956 aa17.84■□□□□ 0.45
TRIM28-207ENST00000597136 PICK1Q9NRD5 415 aa17.84■□□□□ 0.45
TRIM28-207ENST00000597136 GH2P01242 217 aa17.83■□□□□ 0.45
TRIM28-207ENST00000597136 PPATQ06203 517 aa17.83■□□□□ 0.45
TRIM28-207ENST00000597136 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.45
TRIM28-207ENST00000597136 USP26Q9BXU7 913 aa17.83■□□□□ 0.45
TRIM28-207ENST00000597136 GUCY1A2P33402 732 aa17.83■□□□□ 0.44
TRIM28-207ENST00000597136 PPARAQ07869 468 aa17.83■□□□□ 0.44
TRIM28-207ENST00000597136 PPIL2Q13356 520 aa17.83■□□□□ 0.44
TRIM28-207ENST00000597136 ZBTB21Q9ULJ3 1066 aa17.83■□□□□ 0.44
TRIM28-207ENST00000597136 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
TRIM28-207ENST00000597136 PRDM1O75626 825 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 AKR1B1P15121 316 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 HAND2P61296 217 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 MAP4K1Q92918 833 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 PTPN18Q99952 460 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 DSCC1Q9BVC3 393 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 LOC285556D6RIA3 1793 aa17.82■□□□□ 0.44
TRIM28-207ENST00000597136 ROBO3Q96MS0 1386 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 EPB41L2O43491 1005 aaKnown RBP17.81■□□□□ 0.44
TRIM28-207ENST00000597136 ASNSP08243 561 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 TM4SF4P48230 202 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 DOCK3Q8IZD9 2030 aa17.81■□□□□ 0.44
TRIM28-207ENST00000597136 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
TRIM28-207ENST00000597136 RASA1P20936 1047 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 SPP2Q13103 211 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 DGKZQ13574 1117 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 SEPT2Q15019 361 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
TRIM28-207ENST00000597136 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
TRIM28-207ENST00000597136 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
TRIM28-207ENST00000597136 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 IGF2BP3O00425 579 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM28-207ENST00000597136 MOGSQ13724 837 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 RAB3GAP1Q15042 981 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 CCL15Q16663 113 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 CLEC10AQ8IUN9 316 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 ANAPC4Q9UJX5 808 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 GTF2A2P52657 109 aa17.79■□□□□ 0.44
TRIM28-207ENST00000597136 MAP2K1Q02750 393 aaPredicted RBP17.79■□□□□ 0.44
TRIM28-207ENST00000597136 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM28-207ENST00000597136 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
TRIM28-207ENST00000597136 ZMYM6O95789 1325 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 TESPA1A2RU30 521 aaPredicted RBP17.78■□□□□ 0.44
TRIM28-207ENST00000597136 CXCL11O14625 94 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 TRPA1O75762 1119 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 SNAPC2Q13487 334 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 SIAH1Q8IUQ4 282 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 ZNF280CQ8ND82 737 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 CABP5Q9NP86 173 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 TSKSQ9UJT2 592 aa17.78■□□□□ 0.44
TRIM28-207ENST00000597136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM28-207ENST00000597136 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
TRIM28-207ENST00000597136 HSPA1AP0DMV8 641 aaKnown RBP17.77■□□□□ 0.44
TRIM28-207ENST00000597136 HSPA1BP0DMV9 641 aaKnown RBP17.77■□□□□ 0.44
TRIM28-207ENST00000597136 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 IFNL1Q8IU54 200 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 TBC1D10CQ8IV04 446 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 CCDC17Q96LX7 622 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
TRIM28-207ENST00000597136 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms