RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 CERS3Q8IU89 383 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 RAET1EQ8TD07 263 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 HAUS7Q99871 368 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 WDR18Q9BV38 432 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 TMEM106CQ9BVX2 250 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 ARMT1Q9H993 441 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 SERPINB13Q9UIV8 391 aa18.86■□□□□ 0.61
PPFIA4-208ENST00000597023 PRKAB2O43741 272 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 BACE1P56817 501 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 TSHZ3Q63HK5 1081 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 CRNKL1Q9BZJ0 848 aaKnown RBP18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 ASCC2Q9H1I8 757 aaPredicted RBP18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 MCM9Q9NXL9 1143 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
PPFIA4-208ENST00000597023 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 CENPFP49454 3210 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 PEX10O60683 326 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 ADD2P35612 726 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 PRMT2P55345 433 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 MTFR1Q15390 333 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 TMED8Q6PL24 325 aaPredicted RBP18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 TMOD4Q9NZQ9 345 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
PPFIA4-208ENST00000597023 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 MBD4O95243 580 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 CYP2D6P10635 497 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 RRP1P56182 461 aaKnown RBP18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 RAB3GAP1Q15042 981 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 ZYXQ15942 572 aaKnown RBP18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 CERKLQ49MI3 558 aaPredicted RBP18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 TATDN1Q6P1N9 297 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 EHD4Q9H223 541 aa18.83■□□□□ 0.6
PPFIA4-208ENST00000597023 TNPO2O14787 897 aaKnown RBP18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 GRK4P32298 578 aa18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 SHMT1P34896 483 aa18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 PABPC4Q13310 644 aaKnown RBP eCLIP18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 P2RX7Q99572 595 aaKnown RBP18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 DCP1AQ9NPI6 582 aaPredicted RBP18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 EMILIN3Q9NT22 766 aa18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 BIN2Q9UBW5 565 aaPredicted RBP18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 PTPRFP10586 1907 aa18.82■□□□□ 0.6
PPFIA4-208ENST00000597023 FOCADQ5VW36 1801 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 ATAD5Q96QE3 1844 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 C19orf81C9J6K1 198 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 FLT3LGP49771 235 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 ABCB5Q2M3G0 1257 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 DYNLL2Q96FJ2 89 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.66e-7■■□□□ 14
PPFIA4-208ENST00000597023 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 GINM1Q9NU53 330 aa18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 TNRC18O15417 2968 aaPredicted RBP18.81■□□□□ 0.6
PPFIA4-208ENST00000597023 FAM110CQ1W6H9 321 aa18.8■□□□□ 0.6
PPFIA4-208ENST00000597023 SLC44A5Q8NCS7 719 aa18.8■□□□□ 0.6
PPFIA4-208ENST00000597023 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
PPFIA4-208ENST00000597023 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
PPFIA4-208ENST00000597023 MYH1P12882 1939 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 CYP2D7A0A087X1C5 515 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 ELNP15502 786 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 GABPAQ06546 454 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 FEZ1Q99689 392 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 PUS7LQ9H0K6 701 aaKnown RBP18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 CABP5Q9NP86 173 aa18.79■□□□□ 0.6
PPFIA4-208ENST00000597023 ADCY3O60266 1144 aa18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 SEPT2Q15019 361 aa18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 UBE3CQ15386 1083 aa18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 OTUD7AQ8TE49 926 aaPredicted RBP18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 COA7Q96BR5 231 aa18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
PPFIA4-208ENST00000597023 CCL5P13501 91 aa18.77■□□□□ 0.6
PPFIA4-208ENST00000597023 HERVK_113P62684 666 aa18.77■□□□□ 0.6
PPFIA4-208ENST00000597023 SLC4A4Q9Y6R1 1079 aa18.77■□□□□ 0.6
PPFIA4-208ENST00000597023 LOC285556D6RIA3 1793 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 Q3C1V9 767 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 POTEEQ6S8J3 1075 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 SLAIN1Q8ND83 568 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 RNF208Q9H0X6 261 aa18.76■□□□□ 0.59
PPFIA4-208ENST00000597023 BRCA2P51587 3418 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L21D6R901 530 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 UBXN2AP68543 259 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 UNC93B1Q9H1C4 597 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 ATP8A2Q9NTI2 1148 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 RBPJLQ9UBG7 517 aa18.75■□□□□ 0.59
PPFIA4-208ENST00000597023 MKI67P46013 3256 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms