RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C19orf81C9J6K1 198 aa21.42■■□□□ 1.02
SHKBP1-203ENST00000594298 C1orf115Q9H7X2 142 aa21.42■■□□□ 1.02
SHKBP1-203ENST00000594298 TMOD4Q9NZQ9 345 aa21.42■■□□□ 1.02
SHKBP1-203ENST00000594298 DBNLQ9UJU6 430 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-203ENST00000594298 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
SHKBP1-203ENST00000594298 HMGCRP04035 888 aa21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 ZAP70P43403 619 aa21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 JAG1P78504 1218 aa21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 PIH1D3Q9NQM4 214 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 PALD1Q9ULE6 856 aa21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
SHKBP1-203ENST00000594298 IRX3P78415 501 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-203ENST00000594298 CRACR2BQ8N4Y2 399 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-203ENST00000594298 TRIM34Q9BYJ4 488 aa21.4■■□□□ 1.02
SHKBP1-203ENST00000594298 ATAD5Q96QE3 1844 aa21.4■■□□□ 1.02
SHKBP1-203ENST00000594298 USP17L10C9JJH3 530 aa21.39■■□□□ 1.01
SHKBP1-203ENST00000594298 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
SHKBP1-203ENST00000594298 RPAP2Q8IXW5 612 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-203ENST00000594298 ANKLE1Q8NAG6 615 aa21.39■■□□□ 1.01
SHKBP1-203ENST00000594298 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
SHKBP1-203ENST00000594298 RPTORQ8N122 1335 aa21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 EVI5O60447 810 aa21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 CEP85Q6P2H3 762 aa21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 TMED8Q6PL24 325 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 EAF2Q96CJ1 260 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 P2RX7Q99572 595 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 ZBTB21Q9ULJ3 1066 aa21.38■■□□□ 1.01
SHKBP1-203ENST00000594298 HMMRO75330 724 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 GDF11O95390 407 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 CYP7A1P22680 504 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 HERVK_113P62684 666 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 NECAB2Q7Z6G3 386 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 GPRC5AQ8NFJ5 357 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 PAWRQ96IZ0 340 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 TXNRD2Q9NNW7 524 aa21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-203ENST00000594298 A0A1W2PPC1 479 aa21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 DYNLL1P63167 89 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 SHROOM1Q2M3G4 852 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 C20orf194Q5TEA3 1177 aa21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 GTF3C2Q8WUA4 911 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 SOCS4Q8WXH5 440 aa21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 SAP30BPQ9UHR5 308 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-203ENST00000594298 FOCADQ5VW36 1801 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 IDH1O75874 414 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 TATDN1Q6P1N9 297 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 TRIB2Q92519 343 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 EHD4Q9H223 541 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 EMILIN3Q9NT22 766 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 RBPJLQ9UBG7 517 aa21.35■■□□□ 1.01
SHKBP1-203ENST00000594298 MAPK4P31152 587 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 TRIM32Q13049 653 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 MAP3K21Q5TCX8 1036 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 USP17L2Q6R6M4 530 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 DIS3LQ8TF46 1054 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
SHKBP1-203ENST00000594298 CEP290O15078 2479 aa21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 GH2P01242 217 aa21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 CYP2B6P20813 491 aa21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 ERC1Q8IUD2 1116 aa21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 TRMT44Q8IYL2 757 aaKnown RBP21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 C12orf42Q96LP6 360 aa21.33■■□□□ 1.01
SHKBP1-203ENST00000594298 PEX10O60683 326 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 USP5P45974 858 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 MNX1P50219 401 aaPredicted RBP21.32■■□□□ 1
SHKBP1-203ENST00000594298 ERVK-9P63128 1117 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 ERVK-24P63145 666 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 MAP3K12Q12852 859 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 Q3C1V9 767 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 MAGEB6Q8N7X4 407 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 MIGA1Q8NAN2 632 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 USP6NLQ92738 828 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 SERPINB13Q9UIV8 391 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 OGDHLQ9ULD0 1010 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 DOCK3Q8IZD9 2030 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 TRIOBPQ9H2D6 2365 aa21.32■■□□□ 1
SHKBP1-203ENST00000594298 POTEEQ6S8J3 1075 aa21.31■■□□□ 1
SHKBP1-203ENST00000594298 NBPF3Q9H094 633 aa21.31■■□□□ 1
SHKBP1-203ENST00000594298 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
SHKBP1-203ENST00000594298 RANBP2P49792 3224 aaKnown RBP21.31■■□□□ 1
SHKBP1-203ENST00000594298 PLXNB2O15031 1838 aa21.31■■□□□ 1
SHKBP1-203ENST00000594298 PRKAR2AP13861 404 aaKnown RBP21.3■■□□□ 1
SHKBP1-203ENST00000594298 TTC6Q86TZ1 520 aa21.3■■□□□ 1
SHKBP1-203ENST00000594298 PORCNQ9H237 461 aa21.3■■□□□ 1
SHKBP1-203ENST00000594298 NDUFB9Q9Y6M9 179 aa21.3■■□□□ 1
SHKBP1-203ENST00000594298 USP14P54578 494 aa21.29■■□□□ 1
SHKBP1-203ENST00000594298 MORN1Q5T089 497 aa21.29■■□□□ 1
SHKBP1-203ENST00000594298 GPR142Q7Z601 462 aa21.29■■□□□ 1
SHKBP1-203ENST00000594298 AACSQ86V21 672 aa21.29■■□□□ 1
SHKBP1-203ENST00000594298 RIOK1Q9BRS2 568 aaKnown RBP21.29■■□□□ 1
SHKBP1-203ENST00000594298 KIAA1683Q9H0B3 1180 aa21.29■■□□□ 1
SHKBP1-203ENST00000594298 C11orf49Q9H6J7 331 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms