RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 SH3D19Q5HYK7 790 aa15.21■□□□□ 0.03
IRF3-206ENST00000593818 TRMT44Q8IYL2 757 aaKnown RBP15.21■□□□□ 0.03
IRF3-206ENST00000593818 USP6NLQ92738 828 aa15.21■□□□□ 0.03
IRF3-206ENST00000593818 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
IRF3-206ENST00000593818 DDX4Q9NQI0 724 aaKnown RBP15.21■□□□□ 0.03
IRF3-206ENST00000593818 EXOC6BQ9Y2D4 811 aa15.21■□□□□ 0.03
IRF3-206ENST00000593818 SEMA3EO15041 775 aa15.2■□□□□ 0.02
IRF3-206ENST00000593818 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
IRF3-206ENST00000593818 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
IRF3-206ENST00000593818 ZNF280CQ8ND82 737 aa15.2■□□□□ 0.02
IRF3-206ENST00000593818 OSBPL5Q9H0X9 879 aaPredicted RBP15.2■□□□□ 0.02
IRF3-206ENST00000593818 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
IRF3-206ENST00000593818 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
IRF3-206ENST00000593818 CYP2B6P20813 491 aa15.19■□□□□ 0.02
IRF3-206ENST00000593818 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
IRF3-206ENST00000593818 HMGCS2P54868 508 aa15.19■□□□□ 0.02
IRF3-206ENST00000593818 SPP2Q13103 211 aa15.19■□□□□ 0.02
IRF3-206ENST00000593818 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
IRF3-206ENST00000593818 ZSCAN29Q8IWY8 852 aaPredicted RBP15.19■□□□□ 0.02
IRF3-206ENST00000593818 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
IRF3-206ENST00000593818 NUDT12Q9BQG2 462 aa15.19■□□□□ 0.02
IRF3-206ENST00000593818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
IRF3-206ENST00000593818 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
IRF3-206ENST00000593818 ZKSCAN1P17029 563 aaPredicted RBP15.18■□□□□ 0.02
IRF3-206ENST00000593818 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
IRF3-206ENST00000593818 TFCP2Q12800 502 aa15.18■□□□□ 0.02
IRF3-206ENST00000593818 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
IRF3-206ENST00000593818 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
IRF3-206ENST00000593818 LBHD1Q9BQE6 289 aaPredicted RBP15.18■□□□□ 0.02
IRF3-206ENST00000593818 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
IRF3-206ENST00000593818 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
IRF3-206ENST00000593818 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
IRF3-206ENST00000593818 APBB1O00213 710 aa15.17■□□□□ 0.02
IRF3-206ENST00000593818 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
IRF3-206ENST00000593818 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
IRF3-206ENST00000593818 TXNRD2Q9NNW7 524 aa15.17■□□□□ 0.02
IRF3-206ENST00000593818 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
IRF3-206ENST00000593818 FOCADQ5VW36 1801 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 IGHDP01880 384 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 COL9A1P20849 921 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 MAPK4P31152 587 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 HOXA7P31268 230 aaPredicted RBP15.16■□□□□ 0.02
IRF3-206ENST00000593818 RHBDL3P58872 404 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 MORN1Q5T089 497 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 APBA2Q99767 749 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
IRF3-206ENST00000593818 GNL3LQ9NVN8 582 aaKnown RBP15.16■□□□□ 0.02
IRF3-206ENST00000593818 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 MROH7-TTC4A0A0A0MT08 1334 aa15.16■□□□□ 0.02
IRF3-206ENST00000593818 FAM196BA6NMK8 535 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 CAP2P40123 477 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 RGS2P41220 211 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 BTDP43251 543 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 SMAD3P84022 425 aaKnown RBP15.15■□□□□ 0.02
IRF3-206ENST00000593818 PICALMQ13492 652 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 CCL14Q16627 93 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 GPRC5AQ8NFJ5 357 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 DCTPP1Q9H773 170 aa15.15■□□□□ 0.02
IRF3-206ENST00000593818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
IRF3-206ENST00000593818 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 PHKA1P46020 1223 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 HERVK_113P62684 666 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
IRF3-206ENST00000593818 RRP1BQ14684 758 aaKnown RBP15.14■□□□□ 0.01
IRF3-206ENST00000593818 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 MYLIPQ8WY64 445 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
IRF3-206ENST00000593818 ZNF236Q9UL36 1845 aa15.14■□□□□ 0.01
IRF3-206ENST00000593818 PEX10O60683 326 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 SHHQ15465 462 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 GPR142Q7Z601 462 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
IRF3-206ENST00000593818 ERC1Q8IUD2 1116 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 ZNF384Q8TF68 577 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 P2RX7Q99572 595 aaKnown RBP15.13■□□□□ 0.01
IRF3-206ENST00000593818 SENP6Q9GZR1 1112 aaPredicted RBP15.13■□□□□ 0.01
IRF3-206ENST00000593818 PORCNQ9H237 461 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
IRF3-206ENST00000593818 DNM1LO00429 736 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
IRF3-206ENST00000593818 RAB11FIP3O75154 756 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 MAP4K4O95819 1239 aaPredicted RBP15.12■□□□□ 0.01
IRF3-206ENST00000593818 FOSL2P15408 326 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 BACE1P56817 501 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 ERVK-9P63128 1117 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 ERVK-24P63145 666 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 MTMR2Q13614 643 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 RASGRF1Q13972 1273 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 TNNI3KQ59H18 835 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 TJAP1Q5JTD0 557 aa15.12■□□□□ 0.01
IRF3-206ENST00000593818 POTEEQ6S8J3 1075 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms