RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SLC10A3P09131 477 aa22.75■■□□□ 1.23
DDX39A-214ENST00000590556 IMMTQ16891 758 aaKnown RBP22.75■■□□□ 1.23
DDX39A-214ENST00000590556 ABCB5Q2M3G0 1257 aa22.75■■□□□ 1.23
DDX39A-214ENST00000590556 ERO1BQ86YB8 467 aa22.75■■□□□ 1.23
DDX39A-214ENST00000590556 GINM1Q9NU53 330 aa22.75■■□□□ 1.23
DDX39A-214ENST00000590556 ATAD5Q96QE3 1844 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 SPDYE5A6NIY4 337 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 ASNSP08243 561 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 SPRYD7Q5W111 196 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 OPTNQ96CV9 577 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 WNK4Q96J92 1243 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 CABP5Q9NP86 173 aa22.74■■□□□ 1.23
DDX39A-214ENST00000590556 FAM155AB1AL88 458 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-214ENST00000590556 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
DDX39A-214ENST00000590556 PRDM1O75626 825 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 GH2P01242 217 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 PTPRAP18433 802 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 VEGFBP49765 207 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 JAG1P78504 1218 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 SHROOM1Q2M3G4 852 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-214ENST00000590556 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 OTUD5Q96G74 571 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 CCDC17Q96LX7 622 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 ZBTB21Q9ULJ3 1066 aa22.73■■□□□ 1.23
DDX39A-214ENST00000590556 RBM8AQ9Y5S9 174 aaKnown RBP22.73■■□□□ 1.23
DDX39A-214ENST00000590556 WDR33Q9C0J8 1336 aaKnown RBP22.73■■□□□ 1.23
DDX39A-214ENST00000590556 RASA1P20936 1047 aa22.72■■□□□ 1.23
DDX39A-214ENST00000590556 PPATQ06203 517 aa22.72■■□□□ 1.23
DDX39A-214ENST00000590556 MKRN3Q13064 507 aaKnown RBP22.72■■□□□ 1.23
DDX39A-214ENST00000590556 ZNF444Q8N0Y2 327 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-214ENST00000590556 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-214ENST00000590556 ZHX2Q9Y6X8 837 aa22.72■■□□□ 1.23
DDX39A-214ENST00000590556 LAMA4Q16363 1823 aa22.72■■□□□ 1.23
DDX39A-214ENST00000590556 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 REC8O95072 547 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 ZBTB48P10074 688 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-214ENST00000590556 AKR1B1P15121 316 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 GJA5P36382 358 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 PPIL2Q13356 520 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 NBPF3Q9H094 633 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 RNF41Q9H4P4 317 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-214ENST00000590556 INCENPQ9NQS7 918 aa22.71■■□□□ 1.23
DDX39A-214ENST00000590556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.71■■□□□ 1.23
DDX39A-214ENST00000590556 FGRP09769 529 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 NOGQ13253 232 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 RAB3GAP1Q15042 981 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 MFSD6Q6ZSS7 791 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 CCDC84Q86UT8 332 aaPredicted RBP22.7■■□□□ 1.22
DDX39A-214ENST00000590556 TBC1D10CQ8IV04 446 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 DNAJC5GQ8N7S2 189 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 STAG1Q8WVM7 1258 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 TOMM22Q9NS69 142 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 TACC3Q9Y6A5 838 aa22.7■■□□□ 1.22
DDX39A-214ENST00000590556 ORC4O43929 436 aa22.69■■□□□ 1.22
DDX39A-214ENST00000590556 AOC2O75106 756 aa22.69■■□□□ 1.22
DDX39A-214ENST00000590556 PCP11498 1178 aaKnown RBP22.69■■□□□ 1.22
DDX39A-214ENST00000590556 TMEM179Q6ZVK1 233 aa22.69■■□□□ 1.22
DDX39A-214ENST00000590556 IRF6O14896 467 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 CYP21A2P08686 494 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 SEPT2Q15019 361 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
DDX39A-214ENST00000590556 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 AS3MTQ9HBK9 375 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 AFG3L2Q9Y4W6 797 aa22.68■■□□□ 1.22
DDX39A-214ENST00000590556 RANBP6O60518 1105 aaKnown RBP22.67■■□□□ 1.22
DDX39A-214ENST00000590556 TSPY3P0CV98 308 aa22.67■■□□□ 1.22
DDX39A-214ENST00000590556 TSPY8P0CW00 308 aa22.67■■□□□ 1.22
DDX39A-214ENST00000590556 GUCY1A2P33402 732 aa22.67■■□□□ 1.22
DDX39A-214ENST00000590556 KIF23Q02241 960 aaPredicted RBP22.67■■□□□ 1.22
DDX39A-214ENST00000590556 ZNF280CQ8ND82 737 aa22.67■■□□□ 1.22
DDX39A-214ENST00000590556 PHIPQ8WWQ0 1821 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 CXCL11O14625 94 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 MAP2K2P36507 400 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 TFAP4Q01664 338 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 SPP2Q13103 211 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 SNAPC2Q13487 334 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 NECTIN1Q15223 517 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 FAM47AQ5JRC9 791 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 CREB3L3Q68CJ9 461 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 ZIC5Q96T25 663 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 WDR18Q9BV38 432 aa22.66■■□□□ 1.22
DDX39A-214ENST00000590556 MANSC4A6NHS7 340 aaPredicted RBP22.65■■□□□ 1.22
DDX39A-214ENST00000590556 TRIM75PA6NK02 468 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 TSPY2A6NKD2 308 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 SLC27A2O14975 620 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 EIF5BO60841 1220 aaKnown RBP22.65■■□□□ 1.22
DDX39A-214ENST00000590556 GTF2A2P52657 109 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 RNF20Q5VTR2 975 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 NEDD1Q8NHV4 660 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 KANSL2Q9H9L4 492 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 KCNH4Q9UQ05 1017 aa22.65■■□□□ 1.22
DDX39A-214ENST00000590556 NEDD4P46934 1319 aa22.64■■□□□ 1.22
DDX39A-214ENST00000590556 ESR2Q92731 530 aa22.64■■□□□ 1.21
DDX39A-214ENST00000590556 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.64■■□□□ 1.21
DDX39A-214ENST00000590556 CNNM2Q9H8M5 875 aa22.64■■□□□ 1.21
DDX39A-214ENST00000590556 E7EWF7 191 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
DDX39A-214ENST00000590556 CETPP11597 493 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 NT5C2P49902 561 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms