RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	DGKZ	Q13574	1117 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	TAF1C	Q15572	869 aa	Predicted RBP	20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	ZMYM1	Q5SVZ6	1142 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	IFFO2	Q5TF58	517 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	SLC44A5	Q8NCS7	719 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	MCOLN1	Q9GZU1	580 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	ZBTB21	Q9ULJ3	1066 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	SLC4A4	Q9Y6R1	1079 aa		20.85	■□□□□ 0.93
MBD1-221	ENST00000589867	USP17L5	A8MUK1	530 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	POLR3D	P05423	398 aa	Predicted RBP	20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	PDE4A	P27815	886 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	GUCY1A2	P33402	732 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	ZNF280C	Q8ND82	737 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	DYNLL2	Q96FJ2	89 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	WDR18	Q9BV38	432 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	OSBPL3	Q9H4L5	887 aa		20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	20.84	■□□□□ 0.93
MBD1-221	ENST00000589867	ZSWIM8	A7E2V4	1837 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	USP17L12	C9JPN9	530 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	USP17L21	D6R901	530 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	PDHX	O00330	501 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	FOXP2	O15409	715 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	GPAA1	O43292	621 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	ASNS	P08243	561 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	C12orf60	Q5U649	245 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	FSD1	Q9BTV5	496 aa		20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	ZBTB47	Q9UFB7	747 aa	Predicted RBP	20.83	■□□□□ 0.93
MBD1-221	ENST00000589867	TLR2	O60603	784 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	GH2	P01242	217 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	SH3D19	Q5HYK7	790 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	TREML2	Q5T2D2	321 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	CTR9	Q6PD62	1173 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	CTU1	Q7Z7A3	348 aa	Known RBP	20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	ZFYVE28	Q9HCC9	887 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	GINM1	Q9NU53	330 aa		20.82	■□□□□ 0.92
MBD1-221	ENST00000589867	C17orf99	Q6UX52	265 aa		20.81	■□□□□ 0.92
MBD1-221	ENST00000589867	EVI5L	Q96CN4	794 aa		20.81	■□□□□ 0.92
MBD1-221	ENST00000589867	ABHD8	Q96I13	439 aa		20.81	■□□□□ 0.92
MBD1-221	ENST00000589867	TRIM34	Q9BYJ4	488 aa		20.81	■□□□□ 0.92
MBD1-221	ENST00000589867	CYP2C8	P10632	490 aa		20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	HMGCS2	P54868	508 aa		20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	CERKL	Q49MI3	558 aa	Predicted RBP	20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	GADL1	Q6ZQY3	521 aa		20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	FASTKD5	Q7L8L6	764 aa	Known RBP	20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	TBC1D2	Q9BYX2	928 aa		20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	MYH8	P13535	1937 aa		20.8	■□□□□ 0.92
MBD1-221	ENST00000589867	BACE1	P56817	501 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	SP3	Q02447	781 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	SBK1	Q52WX2	424 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	CCDC129	Q6ZRS4	1044 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	CD99L2	Q8TCZ2	262 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	AGTPBP1	Q9UPW5	1226 aa		20.79	■□□□□ 0.92
MBD1-221	ENST00000589867	CTGF	P29279	349 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	CDK8	P49336	464 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	MTMR2	Q13614	643 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	ABCB5	Q2M3G0	1257 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	GIMAP6	Q6P9H5	292 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	C16orf86	Q6ZW13	317 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	PROCA1	Q8NCQ7	364 aa	Predicted RBP	20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	ACER1	Q8TDN7	264 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	CPA4	Q9UI42	421 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	SLC45A1	Q9Y2W3	748 aa		20.78	■□□□□ 0.92
MBD1-221	ENST00000589867	BCR	P11274	1271 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	OTOP1	Q7RTM1	612 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	SIAH1	Q8IUQ4	282 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	FAM227B	Q96M60	508 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	ARHGAP39	Q9C0H5	1083 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	AS3MT	Q9HBK9	375 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	EMILIN3	Q9NT22	766 aa		20.77	■□□□□ 0.92
MBD1-221	ENST00000589867	GREB1L	Q9C091	1923 aa	Predicted RBP	20.76	■□□□□ 0.91
MBD1-221	ENST00000589867		A0A0D9SFI3	127 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	PATL2	C9JE40	543 aa	Known RBP	20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	AKR1B1	P15121	316 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	SEPT2	Q15019	361 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	LRRFIP1	Q32MZ4	808 aa	Known RBP	20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	IFNL3	Q8IZI9	196 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	SWAP70	Q9UH65	585 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	CENPF	P49454	3210 aa		20.76	■□□□□ 0.91
MBD1-221	ENST00000589867	ROBO3	Q96MS0	1386 aa		20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	GNAT2	P19087	354 aa		20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	VPS53	Q5VIR6	699 aa		20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	ERO1A	Q96HE7	468 aa		20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	ARPP21	Q9UBL0	812 aa	Predicted RBP	20.75	■□□□□ 0.91
MBD1-221	ENST00000589867	TAOK2	Q9UL54	1235 aa		20.75	■□□□□ 0.91
MBD1-221	ENST00000589867		A0A1W2PRG0	241 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	USP17L10	C9JJH3	530 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	GSPT1	P15170	499 aa	Known RBP	20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	RAB3GAP1	Q15042	981 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	POTEE	Q6S8J3	1075 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	ZNF589	Q86UQ0	364 aa	Predicted RBP	20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	CLEC10A	Q8IUN9	316 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	DOCK3	Q8IZD9	2030 aa		20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	PARK7	Q99497	189 aa	Known RBP	20.74	■□□□□ 0.91
MBD1-221	ENST00000589867	C19orf81	C9J6K1	198 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	LACTB	P83111	547 aa	Predicted RBP	20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	NMI	Q13287	307 aa	Predicted RBP	20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	TICAM2	Q86XR7	235 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	C12orf42	Q96LP6	360 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	KIAA1683	Q9H0B3	1180 aa		20.73	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms