RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.24
NLE1-205ENST00000588642 NAP1L2Q9ULW6 460 aaPredicted RBP16.52■□□□□ 0.24
NLE1-205ENST00000588642 PITPNM2Q9BZ72 1349 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 NAV1Q8NEY1 1877 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 SH2B2O14492 632 aaPredicted RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 WTAPQ15007 396 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 CERKLQ49MI3 558 aaPredicted RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 CDAN1Q8IWY9 1227 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 FBXL16Q8N461 479 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 ZC3H15Q8WU90 426 aaKnown RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 CCDC17Q96LX7 622 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 TEPSINQ96N21 525 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 PGAP2Q9UHJ9 254 aa16.51■□□□□ 0.23
NLE1-205ENST00000588642 ANGEL1Q9UNK9 670 aaKnown RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
NLE1-205ENST00000588642 MPHOSPH10O00566 681 aaKnown RBP16.5■□□□□ 0.23
NLE1-205ENST00000588642 VEGFAP15692 232 aaPredicted RBP16.5■□□□□ 0.23
NLE1-205ENST00000588642 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 HOOK2Q96ED9 719 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 AGXT2Q9BYV1 514 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 DNAJC18Q9H819 358 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 TPCN1Q9ULQ1 816 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 PPP2R3BQ9Y5P8 575 aa16.5■□□□□ 0.23
NLE1-205ENST00000588642 TNKSO95271 1327 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 TBC1D12O60347 775 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 NMT2O60551 498 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 AKR1B1P15121 316 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 LIFRP42702 1097 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 NBPF12Q5TAG4 269 aaPredicted RBP16.49■□□□□ 0.23
NLE1-205ENST00000588642 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
NLE1-205ENST00000588642 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 KLF18A0A0U1RQI7 1052 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
NLE1-205ENST00000588642 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
NLE1-205ENST00000588642 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 ENAHQ8N8S7 591 aaPredicted RBP16.48■□□□□ 0.23
NLE1-205ENST00000588642 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
NLE1-205ENST00000588642 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
NLE1-205ENST00000588642 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
NLE1-205ENST00000588642 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 STK3Q13188 491 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 SEC23AQ15436 765 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 ME3Q16798 604 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 ZNF274Q96GC6 653 aaPredicted RBP16.47■□□□□ 0.23
NLE1-205ENST00000588642 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
NLE1-205ENST00000588642 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
NLE1-205ENST00000588642 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
NLE1-205ENST00000588642 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 ADM5C9JUS6 153 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 GDF11O95390 407 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 LARGE1O95461 756 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
NLE1-205ENST00000588642 EVCP57679 992 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
NLE1-205ENST00000588642 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 FOCADQ5VW36 1801 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 MYH1P12882 1939 aa16.46■□□□□ 0.23
NLE1-205ENST00000588642 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 PFKFB2O60825 505 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 GH2P01242 217 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
NLE1-205ENST00000588642 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 RCSD1Q6JBY9 416 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 CEP95Q96GE4 821 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 ZNF341Q9BYN7 854 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms