RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 CWC27Q6UX04 472 aaKnown RBP20.65■□□□□ 0.9
DNMT1-212ENST00000587197 SCYL3Q8IZE3 742 aa20.65■□□□□ 0.9
DNMT1-212ENST00000587197 NACAP1Q9BZK3 213 aa20.65■□□□□ 0.9
DNMT1-212ENST00000587197 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
DNMT1-212ENST00000587197 CDK5RAP2Q96SN8 1893 aa20.64■□□□□ 0.9
DNMT1-212ENST00000587197 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 RAD50Q92878 1312 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 CTNND1O60716 968 aaKnown RBP20.64■□□□□ 0.89
DNMT1-212ENST00000587197 ALX1Q15699 326 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 C12orf60Q5U649 245 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 FBXO46Q6PJ61 603 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-212ENST00000587197 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 AMOTL1Q8IY63 956 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 RUFY2Q8WXA3 655 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.64■□□□□ 0.89
DNMT1-212ENST00000587197 ARPP21Q9UBL0 812 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-212ENST00000587197 KCNH4Q9UQ05 1017 aa20.64■□□□□ 0.89
DNMT1-212ENST00000587197 USP17L12C9JPN9 530 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 USP17L21D6R901 530 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 CXCL11O14625 94 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 PLCD1P51178 756 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 GABPAQ06546 454 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 CTR9Q6PD62 1173 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-212ENST00000587197 IFNL3Q8IZI9 196 aa20.63■□□□□ 0.89
DNMT1-212ENST00000587197 CRACR2BQ8N4Y2 399 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-212ENST00000587197 EPB41L4AQ9HCS5 686 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-212ENST00000587197 BTBD19C9JJ37 291 aa20.62■□□□□ 0.89
DNMT1-212ENST00000587197 FOXP2O15409 715 aa20.62■□□□□ 0.89
DNMT1-212ENST00000587197 APPP05067 770 aa20.62■□□□□ 0.89
DNMT1-212ENST00000587197 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
DNMT1-212ENST00000587197 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
DNMT1-212ENST00000587197 ANKRD23Q86SG2 305 aa20.61■□□□□ 0.89
DNMT1-212ENST00000587197 TRIM34Q9BYJ4 488 aa20.61■□□□□ 0.89
DNMT1-212ENST00000587197 GINM1Q9NU53 330 aa20.61■□□□□ 0.89
DNMT1-212ENST00000587197 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
DNMT1-212ENST00000587197 ZHX2Q9Y6X8 837 aa20.61■□□□□ 0.89
DNMT1-212ENST00000587197 DDX60LQ5H9U9 1706 aaKnown RBP20.61■□□□□ 0.89
DNMT1-212ENST00000587197 ZMYM6O95789 1325 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 TLR2O60603 784 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 SLURP2P0DP57 97 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
DNMT1-212ENST00000587197 PTPRAP18433 802 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 TDO2P48775 406 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 VPS53Q5VIR6 699 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 TATDN1Q6P1N9 297 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 FASTKD5Q7L8L6 764 aaKnown RBP20.6■□□□□ 0.89
DNMT1-212ENST00000587197 NAPBQ9H115 298 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 SWAP70Q9UH65 585 aa20.6■□□□□ 0.89
DNMT1-212ENST00000587197 MYH1P12882 1939 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 NAV1Q8NEY1 1877 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 SGSM2O43147 1006 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 CYP2D6P10635 497 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 KIF22Q14807 665 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 SLC4A8Q2Y0W8 1093 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 OTOP1Q7RTM1 612 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 CD99L2Q8TCZ2 262 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 DSCC1Q9BVC3 393 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
DNMT1-212ENST00000587197 FAM196BA6NMK8 535 aa20.58■□□□□ 0.89
DNMT1-212ENST00000587197 CAP2P40123 477 aa20.58■□□□□ 0.89
DNMT1-212ENST00000587197 RGS19P49795 217 aa20.58■□□□□ 0.89
DNMT1-212ENST00000587197 C16orf86Q6ZW13 317 aa20.58■□□□□ 0.89
DNMT1-212ENST00000587197 TBC1D2Q9BYX2 928 aa20.58■□□□□ 0.89
DNMT1-212ENST00000587197 ROBO3Q96MS0 1386 aa20.58■□□□□ 0.88
DNMT1-212ENST00000587197 SIPA1L1O43166 1804 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 CYP2D7A0A087X1C5 515 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 PDHXO00330 501 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 CDC45O75419 566 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 FGAP02671 866 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 SHMT1P34896 483 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
DNMT1-212ENST00000587197 IL25Q9H293 177 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
DNMT1-212ENST00000587197 MLLT1Q03111 559 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-212ENST00000587197 EVX2Q03828 476 aa20.56■□□□□ 0.88
DNMT1-212ENST00000587197 ANAPC4Q9UJX5 808 aa20.56■□□□□ 0.88
DNMT1-212ENST00000587197 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
DNMT1-212ENST00000587197 MINDY4BA8MYZ0 360 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 ASNSP08243 561 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 CDK8P49336 464 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 PPARAQ07869 468 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 CERKLQ49MI3 558 aaPredicted RBP20.55■□□□□ 0.88
DNMT1-212ENST00000587197 CASC1Q6TDU7 716 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
DNMT1-212ENST00000587197 DYNLL2Q96FJ2 89 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 CCDC17Q96LX7 622 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 PARK7Q99497 189 aaKnown RBP20.55■□□□□ 0.88
DNMT1-212ENST00000587197 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 ZNF287Q9HBT7 754 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 PTPN22Q9Y2R2 807 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 DOCK1Q14185 1865 aa20.55■□□□□ 0.88
DNMT1-212ENST00000587197 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
DNMT1-212ENST00000587197 GADL1Q6ZQY3 521 aa20.54■□□□□ 0.88
DNMT1-212ENST00000587197 AS3MTQ9HBK9 375 aa20.54■□□□□ 0.88
DNMT1-212ENST00000587197 CTNNA3Q9UI47 895 aa20.54■□□□□ 0.88
DNMT1-212ENST00000587197 BAZ2AQ9UIF9 1905 aaKnown RBP20.54■□□□□ 0.88
DNMT1-212ENST00000587197 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
DNMT1-212ENST00000587197 USP17L5A8MUK1 530 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms