RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 TICAM2Q86XR7 235 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 NOA1Q8NC60 698 aaKnown RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 EPB41L4AQ9HCS5 686 aaPredicted RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 PHKA1P46020 1223 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 DPYDQ12882 1025 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■□□ 14.8
UBE2O-204ENST00000587127 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 HOOK1Q9UJC3 728 aaKnown RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 PDE6AP16499 860 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 LDHAL6AQ6ZMR3 332 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2O-204ENST00000587127 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
UBE2O-204ENST00000587127 WNT7AO00755 349 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 PRKAB2O43741 272 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 GPTP24298 496 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 ACTN2P35609 894 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
UBE2O-204ENST00000587127 GYPCP04921 128 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 SAFBQ15424 915 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBE2O-204ENST00000587127 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 TMEM87BQ96K49 555 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 GREM2Q9H772 168 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 TRIM10Q9UDY6 481 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
UBE2O-204ENST00000587127 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
UBE2O-204ENST00000587127 TJP1Q07157 1748 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 MFAP3LO75121 409 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 TNNT3P45378 269 aaPredicted RBP12.35□□□□□ -0.43
UBE2O-204ENST00000587127 ERVK-24P63145 666 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 HDXQ7Z353 690 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 SGMS1Q86VZ5 419 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 TFR2Q9UP52 801 aa12.35□□□□□ -0.43
UBE2O-204ENST00000587127 SMIM22K7EJ46 135 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
UBE2O-204ENST00000587127 SRLQ86TD4 932 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
UBE2O-204ENST00000587127 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 SYNRGQ9UMZ2 1314 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 IFNAR1P17181 557 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 PBX1P40424 430 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 RAB21Q9UL25 225 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 GLI3P10071 1580 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 LRRIQ3A6PVS8 624 aaPredicted RBP12.34□□□□□ -0.43
UBE2O-204ENST00000587127 CUL4BQ13620 913 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 CASP8Q14790 479 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 SPATA1Q5VX52 437 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
UBE2O-204ENST00000587127 SRPRBQ9Y5M8 271 aaKnown RBP12.34□□□□□ -0.43
UBE2O-204ENST00000587127 MBD4O95243 580 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 TCIRG1Q13488 830 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 RTN1Q16799 776 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 NAPBQ9H115 298 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 VPS16Q9H269 839 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 PSD3Q9NYI0 1048 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 LMTK3Q96Q04 1460 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 PRDM1O75626 825 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 ITGA6P23229 1130 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 RILPL1Q5EBL4 403 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.44
UBE2O-204ENST00000587127 MYO5AQ9Y4I1 1855 aaKnown RBP12.33□□□□□ -0.44
UBE2O-204ENST00000587127 SPEF2Q9C093 1822 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
UBE2O-204ENST00000587127 USP5P45974 858 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 HNRNPLLQ8WVV9 542 aaKnown RBP12.33□□□□□ -0.44
UBE2O-204ENST00000587127 PAGE5Q96GU1 130 aa12.33□□□□□ -0.44
UBE2O-204ENST00000587127 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms