RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
HDAC5-203ENST00000586339 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-203ENST00000586339 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 C19orf81C9J6K1 198 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 ADCY3O60266 1144 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 CCL5P13501 91 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 BACE1P56817 501 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
HDAC5-203ENST00000586339 MTMR2Q13614 643 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
HDAC5-203ENST00000586339 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
HDAC5-203ENST00000586339 KIF1BPQ96EK5 621 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 ASCC2Q9H1I8 757 aaPredicted RBP17.12■□□□□ 0.33
HDAC5-203ENST00000586339 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
HDAC5-203ENST00000586339 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-203ENST00000586339 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
HDAC5-203ENST00000586339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC5-203ENST00000586339 RNF208Q9H0X6 261 aa17.11■□□□□ 0.33
HDAC5-203ENST00000586339 EHD4Q9H223 541 aa17.11■□□□□ 0.33
HDAC5-203ENST00000586339 USP17L10C9JJH3 530 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 GDF11O95390 407 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 USP5P45974 858 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-203ENST00000586339 GTF3C2Q8WUA4 911 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-203ENST00000586339 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
HDAC5-203ENST00000586339 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
HDAC5-203ENST00000586339 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 INHAP05111 366 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 TTC6Q86TZ1 520 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
HDAC5-203ENST00000586339 JAG1P78504 1218 aa17.08■□□□□ 0.32
HDAC5-203ENST00000586339 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
HDAC5-203ENST00000586339 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.32
HDAC5-203ENST00000586339 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.32
HDAC5-203ENST00000586339 COG6Q9Y2V7 657 aa17.08■□□□□ 0.32
HDAC5-203ENST00000586339 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.32
HDAC5-203ENST00000586339 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
HDAC5-203ENST00000586339 ELNP15502 786 aa17.07■□□□□ 0.32
HDAC5-203ENST00000586339 HABP4Q5JVS0 413 aaKnown RBP17.07■□□□□ 0.32
HDAC5-203ENST00000586339 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
HDAC5-203ENST00000586339 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
HDAC5-203ENST00000586339 RCAN3Q9UKA8 241 aa17.07■□□□□ 0.32
HDAC5-203ENST00000586339 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 SGPL1O95470 568 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 GH2P01242 217 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 HMGCRP04035 888 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 PDE6AP16499 860 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 HERVK_113P62684 666 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 SHROOM1Q2M3G4 852 aaPredicted RBP17.06■□□□□ 0.32
HDAC5-203ENST00000586339 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
HDAC5-203ENST00000586339 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
HDAC5-203ENST00000586339 RANBP2P49792 3224 aaKnown RBP17.05■□□□□ 0.32
HDAC5-203ENST00000586339 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
HDAC5-203ENST00000586339 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
HDAC5-203ENST00000586339 SOCS4Q8WXH5 440 aa17.05■□□□□ 0.32
HDAC5-203ENST00000586339 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
HDAC5-203ENST00000586339 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
HDAC5-203ENST00000586339 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
HDAC5-203ENST00000586339 ALPK3Q96L96 1907 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 APBB1O00213 710 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 USP14P54578 494 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 CERKLQ49MI3 558 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-203ENST00000586339 GPRC5AQ8NFJ5 357 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
HDAC5-203ENST00000586339 FEZ1Q99689 392 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
HDAC5-203ENST00000586339 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 GOLIM4O00461 696 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-203ENST00000586339 MAPK4P31152 587 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 GABPAQ06546 454 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 ABCB5Q2M3G0 1257 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
HDAC5-203ENST00000586339 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 CRISPLD2Q9H0B8 497 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
HDAC5-203ENST00000586339 H0YGN5 161 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
HDAC5-203ENST00000586339 ATP5JP18859 108 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 SHMT1P34896 483 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 PLCD1P51178 756 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 ERVK-24P63145 666 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 DPF3Q92784 378 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 DEFB118Q96PH6 123 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC5-203ENST00000586339 TXNRD2Q9NNW7 524 aa17.02■□□□□ 0.32
HDAC5-203ENST00000586339 RPTORQ8N122 1335 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 764.4 ms