RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 SH3D19Q5HYK7 790 aa22.01■■□□□ 1.11
HMG20B-216ENST00000585900 RIOK1Q9BRS2 568 aaKnown RBP22.01■■□□□ 1.11
HMG20B-216ENST00000585900 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.01■■□□□ 1.114e-11■■■□□ 17.3
HMG20B-216ENST00000585900 PAG1Q9NWQ8 432 aa22.01■■□□□ 1.11
HMG20B-216ENST00000585900 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
HMG20B-216ENST00000585900 ZNF532Q9HCE3 1301 aa22.01■■□□□ 1.11
HMG20B-216ENST00000585900 C19orf81C9J6K1 198 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 TNPO2O14787 897 aaKnown RBP22■■□□□ 1.11
HMG20B-216ENST00000585900 ATP5JP18859 108 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 GRK4P32298 578 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 GCLCP48506 637 aaPredicted RBP22■■□□□ 1.11
HMG20B-216ENST00000585900 IRX3P78415 501 aaPredicted RBP22■■□□□ 1.11
HMG20B-216ENST00000585900 PRKCZQ05513 592 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 FAM110CQ1W6H9 321 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 ANKRD13CQ8N6S4 541 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 BOLA2Q9H3K6 86 aa22■■□□□ 1.11
HMG20B-216ENST00000585900 USP17L10C9JJH3 530 aa21.99■■□□□ 1.11
HMG20B-216ENST00000585900 POLR3DP05423 398 aaPredicted RBP21.99■■□□□ 1.11
HMG20B-216ENST00000585900 PRPF38BQ5VTL8 546 aaKnown RBP21.99■■□□□ 1.11
HMG20B-216ENST00000585900 BIN2Q9UBW5 565 aaPredicted RBP21.99■■□□□ 1.11
HMG20B-216ENST00000585900 KIAA0100Q14667 2235 aaKnown RBP21.98■■□□□ 1.11
HMG20B-216ENST00000585900 EN2P19622 333 aaPredicted RBP21.98■■□□□ 1.11
HMG20B-216ENST00000585900 UBXN2AP68543 259 aa21.98■■□□□ 1.11
HMG20B-216ENST00000585900 SLAIN1Q8ND83 568 aa21.98■■□□□ 1.11
HMG20B-216ENST00000585900 COA7Q96BR5 231 aa21.98■■□□□ 1.11
HMG20B-216ENST00000585900 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
HMG20B-216ENST00000585900 CENPFP49454 3210 aa21.98■■□□□ 1.11
HMG20B-216ENST00000585900 MYH1P12882 1939 aa21.98■■□□□ 1.11
HMG20B-216ENST00000585900 GH2P01242 217 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 TATDN1Q6P1N9 297 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 EDC3Q96F86 508 aaKnown RBP21.97■■□□□ 1.11
HMG20B-216ENST00000585900 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 FEZ1Q99689 392 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 HAUS7Q99871 368 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
HMG20B-216ENST00000585900 JAG1P78504 1218 aa21.96■■□□□ 1.11
HMG20B-216ENST00000585900 CERKLQ49MI3 558 aaPredicted RBP21.96■■□□□ 1.11
HMG20B-216ENST00000585900 CABP5Q9NP86 173 aa21.96■■□□□ 1.11
HMG20B-216ENST00000585900 TCRBV5S4A2TA0A5A2 114 aa21.95■■□□□ 1.1
HMG20B-216ENST00000585900 ABCB5Q2M3G0 1257 aa21.95■■□□□ 1.1
HMG20B-216ENST00000585900 SHROOM1Q2M3G4 852 aaPredicted RBP21.95■■□□□ 1.1
HMG20B-216ENST00000585900 ZSCAN25Q6NSZ9 544 aa21.95■■□□□ 1.1
HMG20B-216ENST00000585900 LCORLQ8N3X6 602 aa21.95■■□□□ 1.1
HMG20B-216ENST00000585900 NAV1Q8NEY1 1877 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 HOXA7P31268 230 aaPredicted RBP21.94■■□□□ 1.1
HMG20B-216ENST00000585900 ADD2P35612 726 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 FLT3LGP49771 235 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 RAB3GAP1Q15042 981 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 USP17L2Q6R6M4 530 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 DDRGK1Q96HY6 314 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 GABRQQ9UN88 632 aa21.94■■□□□ 1.1
HMG20B-216ENST00000585900 MGAMO43451 1857 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
HMG20B-216ENST00000585900 ADCY3O60266 1144 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 PLCD1P51178 756 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 USP14P54578 494 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 IRF5Q13568 498 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 DDX60LQ5H9U9 1706 aaKnown RBP21.93■■□□□ 1.1
HMG20B-216ENST00000585900 AMOTL1Q8IY63 956 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 GTF3C2Q8WUA4 911 aaPredicted RBP21.93■■□□□ 1.1
HMG20B-216ENST00000585900 SDR42E1Q8WUS8 393 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 ARMT1Q9H993 441 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 ECHDC1Q9NTX5 307 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 TAOK2Q9UL54 1235 aa21.93■■□□□ 1.1
HMG20B-216ENST00000585900 MBD4O95243 580 aa21.92■■□□□ 1.1
HMG20B-216ENST00000585900 UBE3CQ15386 1083 aa21.92■■□□□ 1.1
HMG20B-216ENST00000585900 MTFR1Q15390 333 aa21.92■■□□□ 1.1
HMG20B-216ENST00000585900 DCTPP1Q9H773 170 aa21.92■■□□□ 1.1
HMG20B-216ENST00000585900 DCP1AQ9NPI6 582 aaPredicted RBP21.92■■□□□ 1.1
HMG20B-216ENST00000585900 CCL5P13501 91 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 SHMT1P34896 483 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 HERVK_113P62684 666 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 ZYXQ15942 572 aaKnown RBP21.91■■□□□ 1.1
HMG20B-216ENST00000585900 PXYLP1Q8TE99 480 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 RNF208Q9H0X6 261 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 ATP8A2Q9NTI2 1148 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 MORF4L1Q9UBU8 362 aa21.91■■□□□ 1.1
HMG20B-216ENST00000585900 MPHOSPH10O00566 681 aaKnown RBP21.9■■□□□ 1.1
HMG20B-216ENST00000585900 C12orf42Q96LP6 360 aa21.9■■□□□ 1.1
HMG20B-216ENST00000585900 P2RX7Q99572 595 aaKnown RBP21.9■■□□□ 1.1
HMG20B-216ENST00000585900 EMILIN3Q9NT22 766 aa21.9■■□□□ 1.1
HMG20B-216ENST00000585900 SWAP70Q9UH65 585 aa21.9■■□□□ 1.1
HMG20B-216ENST00000585900 ELNP15502 786 aa21.89■■□□□ 1.09
HMG20B-216ENST00000585900 RRP1P56182 461 aaKnown RBP21.89■■□□□ 1.09
HMG20B-216ENST00000585900 GABPAQ06546 454 aa21.89■■□□□ 1.09
HMG20B-216ENST00000585900 CCAR1Q8IX12 1150 aaKnown RBP21.89■■□□□ 1.09
HMG20B-216ENST00000585900 GPRC5AQ8NFJ5 357 aa21.89■■□□□ 1.09
HMG20B-216ENST00000585900 KIAA1683Q9H0B3 1180 aa21.89■■□□□ 1.09
HMG20B-216ENST00000585900 INHAP05111 366 aa21.88■■□□□ 1.09
HMG20B-216ENST00000585900 GJB1P08034 283 aa21.88■■□□□ 1.09
HMG20B-216ENST00000585900 BRCA2P51587 3418 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L15C9J2P7 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L13C9JLJ4 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L11C9JVI0 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L18D6R9N7 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L22D6RA61 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L17D6RBQ6 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L19D6RCP7 530 aa21.87■■□□□ 1.09
HMG20B-216ENST00000585900 USP17L20D6RJB6 530 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms