RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 MIGA1Q8NAN2 632 aa18.51■□□□□ 0.55
SREBF1-222ENST00000583732 EAF2Q96CJ1 260 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-222ENST00000583732 ALPK3Q96L96 1907 aa18.51■□□□□ 0.55
SREBF1-222ENST00000583732 ZBTB7BO15156 539 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-222ENST00000583732 HLA-DOAP06340 250 aa18.5■□□□□ 0.55
SREBF1-222ENST00000583732 BACE1P56817 501 aa18.5■□□□□ 0.55
SREBF1-222ENST00000583732 ZNF512BQ96KM6 892 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-222ENST00000583732 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
SREBF1-222ENST00000583732 ZBTB21Q9ULJ3 1066 aa18.5■□□□□ 0.55
SREBF1-222ENST00000583732 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
SREBF1-222ENST00000583732 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
SREBF1-222ENST00000583732 USP5P45974 858 aa18.49■□□□□ 0.55
SREBF1-222ENST00000583732 TRIM32Q13049 653 aa18.49■□□□□ 0.55
SREBF1-222ENST00000583732 FOXP4Q8IVH2 680 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-222ENST00000583732 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
SREBF1-222ENST00000583732 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.49■□□□□ 0.551e-9■■■■□ 21.1
SREBF1-222ENST00000583732 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-222ENST00000583732 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
SREBF1-222ENST00000583732 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
SREBF1-222ENST00000583732 HMGCRP04035 888 aa18.48■□□□□ 0.55
SREBF1-222ENST00000583732 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
SREBF1-222ENST00000583732 MIER1Q8N108 512 aa18.48■□□□□ 0.55
SREBF1-222ENST00000583732 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
SREBF1-222ENST00000583732 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
SREBF1-222ENST00000583732 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
SREBF1-222ENST00000583732 DDX60LQ5H9U9 1706 aaKnown RBP18.47■□□□□ 0.55
SREBF1-222ENST00000583732 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 CYP2B6P20813 491 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 HERVK_113P62684 666 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 ZYXQ15942 572 aaKnown RBP18.47■□□□□ 0.55
SREBF1-222ENST00000583732 AACSQ86V21 672 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
SREBF1-222ENST00000583732 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 DIS3LQ8TF46 1054 aaKnown RBP18.47■□□□□ 0.55
SREBF1-222ENST00000583732 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
SREBF1-222ENST00000583732 MORF4L1Q9UBU8 362 aa18.47■□□□□ 0.55
SREBF1-222ENST00000583732 CEP290O15078 2479 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 EVI5O60447 810 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 GH2P01242 217 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 PAGR1Q9BTK6 254 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 BCL11AQ9H165 835 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 GJD2Q9UKL4 321 aa18.46■□□□□ 0.55
SREBF1-222ENST00000583732 C19orf81C9J6K1 198 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-222ENST00000583732 TRIB2Q92519 343 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 FEZ1Q99689 392 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 CRISPLD2Q9H0B8 497 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 IL1RAPL2Q9NP60 686 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
SREBF1-222ENST00000583732 APBB1O00213 710 aa18.44■□□□□ 0.54
SREBF1-222ENST00000583732 MAP3K12Q12852 859 aa18.44■□□□□ 0.54
SREBF1-222ENST00000583732 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
SREBF1-222ENST00000583732 GPRC5AQ8NFJ5 357 aa18.44■□□□□ 0.54
SREBF1-222ENST00000583732 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-222ENST00000583732 EMILIN3Q9NT22 766 aa18.44■□□□□ 0.54
SREBF1-222ENST00000583732 IGSF3O75054 1194 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
SREBF1-222ENST00000583732 NUDT12Q9BQG2 462 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
SREBF1-222ENST00000583732 RBPJLQ9UBG7 517 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 TRIOBPQ9H2D6 2365 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
SREBF1-222ENST00000583732 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 ERVK-24P63145 666 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 Q3C1V9 767 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 C7orf61Q8IZ16 206 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 PORCNQ9H237 461 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 SERPINB13Q9UIV8 391 aa18.42■□□□□ 0.54
SREBF1-222ENST00000583732 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
SREBF1-222ENST00000583732 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-222ENST00000583732 MAPK4P31152 587 aa18.41■□□□□ 0.54
SREBF1-222ENST00000583732 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-222ENST00000583732 TATDN1Q6P1N9 297 aa18.41■□□□□ 0.54
SREBF1-222ENST00000583732 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
SREBF1-222ENST00000583732 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
SREBF1-222ENST00000583732 FRMPD3Q5JV73 1810 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 MAGEB6P1A0A0J9YX57 407 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 CAPN2P17655 700 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 ABCB5Q2M3G0 1257 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 GPR142Q7Z601 462 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 EHD4Q9H223 541 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 PRO3102Q9H379 93 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 MYH8P13535 1937 aa18.4■□□□□ 0.54
SREBF1-222ENST00000583732 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-222ENST00000583732 PLCD1P51178 756 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 EVX2Q03828 476 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 CCL14Q16627 93 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 WDR78Q5VTH9 848 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 PLEKHH3Q7Z736 793 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 ANKLE1Q8NAG6 615 aa18.39■□□□□ 0.53
SREBF1-222ENST00000583732 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms