RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 XAGE2Q96GT9 111 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 NOL10Q9BSC4 688 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 PLXNB2O15031 1838 aa15.07■□□□□ 0
CDK5RAP3-216ENST00000579853 USP17L10C9JJH3 530 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 DSG3P32926 999 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 CACNB2Q08289 660 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 MTMR2Q13614 643 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 TEX11Q8IYF3 940 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 P2RX7Q99572 595 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 RAI14Q9P0K7 980 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 NCOR1O75376 2440 aa15.06■□□□□ 0
CDK5RAP3-216ENST00000579853 POTEB2H3BUK9 544 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 GLRX3O76003 335 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 BAG3O95817 575 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 PLCG2P16885 1265 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 ERVK-9P63128 1117 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 ERVK-24P63145 666 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 GORABQ5T7V8 394 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 LHX8Q68G74 356 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 SPATA5Q8NB90 893 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 ZNF384Q8TF68 577 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 USP6NLQ92738 828 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 APBA2Q99767 749 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 TRIM34Q9BYJ4 488 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 BDP1A6H8Y1 2624 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 MUC3AQ02505 3323 aa15.05■□□□□ -0
CDK5RAP3-216ENST00000579853 MSCO60682 206 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 CCNA1P78396 465 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 MORN1Q5T089 497 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 GPR142Q7Z601 462 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 PLEKHH3Q7Z736 793 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 NEUROD6Q96NK8 337 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 HMG20BQ9P0W2 317 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
CDK5RAP3-216ENST00000579853 IGSF3O75054 1194 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 ARID4AP29374 1257 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 TFCP2Q12800 502 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 RRP1BQ14684 758 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 LRP2BPQ9P2M1 347 aa15.03■□□□□ -0
CDK5RAP3-216ENST00000579853 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 UQCRFS1P1P0C7P4 283 aa15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 CCND3P30281 292 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 ZNF697Q5TEC3 545 aa15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 METTL16Q86W50 562 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 RABGAP1Q9Y3P9 1069 aa15.02■□□□□ -0
CDK5RAP3-216ENST00000579853 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 GNAI3P08754 354 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MAP2K5Q13163 448 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MTX1Q13505 466 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 TBC1D9Q6ZT07 1266 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 EDC3Q96F86 508 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PORCNQ9H237 461 aa15.01□□□□□ -0.01
CDK5RAP3-216ENST00000579853 HLA-DOAP06340 250 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PPP4CP60510 307 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 SLFN5Q08AF3 891 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 CCL14Q16627 93 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 Q3C1V9 767 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 LPAR1Q92633 364 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 ZBTB21Q9ULJ3 1066 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 IVNS1ABPQ9Y6Y0 642 aa15□□□□□ -0.01
CDK5RAP3-216ENST00000579853 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PI16Q6UXB8 463 aa14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MEIS3Q99687 375 aa14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 AATFQ9NY61 560 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 DDX20Q9UHI6 824 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 NOB1Q9ULX3 412 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L15C9J2P7 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L13C9JLJ4 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L11C9JVI0 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L18D6R9N7 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L22D6RA61 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L17D6RBQ6 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L19D6RCP7 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP17L20D6RJB6 530 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 DNM1LO00429 736 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 PEX10O60683 326 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 HOXC6P09630 235 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 MCAMP43121 646 aa14.98□□□□□ -0.01
CDK5RAP3-216ENST00000579853 USP14P54578 494 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms