RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 OXER1Q8TDS5 423 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 SERTAD1Q9UHV2 236 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 SERPINB2P05120 415 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 TPM1P09493 284 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 IL17RAQ96F46 866 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 GPATCH11Q8N954 259 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 POLR3EQ9NVU0 708 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 PCDHB6Q9Y5E3 794 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 KIF20AO95235 890 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 LIFRP42702 1097 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 ARID5BQ14865 1188 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 NFIXQ14938 502 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 RASGRP4Q8TDF6 673 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 IFNAR1P17181 557 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 SCNN1DP51172 638 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 DACH1Q9UI36 760 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CMA1P23946 247 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CDK5RAP3Q96JB5 506 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM1P0DP23 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM2P0DP24 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM3P0DP25 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 NAPAP54920 295 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
DDX42-208ENST00000578681 ZHX3Q9H4I2 956 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 AFF2P51816 1311 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 COBLO75128 1261 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 UBA7P41226 1012 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 MRC1P22897 1456 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CUTAO60888 179 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CDC25AP30304 524 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 XPO4Q9C0E2 1151 aaKnown RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 CBFA2T2O43439 604 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 WDHD1O75717 1129 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 GTPBP4Q9BZE4 634 aaKnown RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX42-208ENST00000578681 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 FILIP1LQ4L180 1135 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 PCDHA5Q9Y5H7 936 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 PNMA1Q8ND90 353 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
DDX42-208ENST00000578681 TCP10Q12799 353 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 RIC1Q4ADV7 1423 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 BTDP43251 543 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
DDX42-208ENST00000578681 PPFIBP1Q86W92 1011 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 BARGINQ6ZT62 677 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 NKX2-3Q8TAU0 364 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 GPCPD1Q9NPB8 672 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 FOXP2O15409 715 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 MMP1P03956 469 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 DMTNQ08495 405 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 CTR9Q6PD62 1173 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 RBM28Q9NW13 759 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 AP5Z1O43299 807 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 VPS72Q15906 364 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SH3RF3Q8TEJ3 882 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 APBA3O96018 575 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 NLRP12P59046 1061 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SLF2Q8IX21 1173 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQ27 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQ64 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQD8 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 TCRBV5S4A2TA0A5A2 114 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 NBPF3Q9H094 633 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 CASP1P29466 404 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 FANCCQ00597 558 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 MYL5Q02045 173 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 ALX1Q15699 326 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 FMR1NBQ8N0W7 255 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 DYNC1I1O14576 645 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 TRPM3Q9HCF6 1732 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 TDRD7Q8NHU6 1098 aaKnown RBP18.89■□□□□ 0.62
DDX42-208ENST00000578681 CACTINQ8WUQ7 758 aaKnown RBP18.89■□□□□ 0.62
DDX42-208ENST00000578681 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms