RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
NDEL1-204ENST00000578172 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
NDEL1-204ENST00000578172 ZBTB22O15209 634 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 ZSCAN12O43309 604 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
NDEL1-204ENST00000578172 ETF1P62495 437 aaKnown RBP15.54■□□□□ 0.08
NDEL1-204ENST00000578172 WDR24Q96S15 920 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 TFR2Q9UP52 801 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 PPP2R2CQ9Y2T4 447 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 TOPAZ1Q8N9V7 1692 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 GPS2Q13227 327 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 UBE3CQ15386 1083 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
NDEL1-204ENST00000578172 ADGRA1Q86SQ6 560 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 PSMB7Q99436 277 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 ZHX3Q9H4I2 956 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 GUCA1BQ9UMX6 200 aa15.54■□□□□ 0.08
NDEL1-204ENST00000578172 CYP19A1P11511 503 aaPredicted RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 KLRK1P26718 216 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 NAP1L1P55209 391 aaKnown RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 MRPS25P82663 173 aaKnown RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 WWC2Q6AWC2 1192 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 GOLGA6L1Q8N7Z2 621 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.089e-7■■■□□ 17.4
NDEL1-204ENST00000578172 NCAPHQ15003 741 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 RNF41Q9H4P4 317 aaPredicted RBP15.53■□□□□ 0.08
NDEL1-204ENST00000578172 NALCNQ8IZF0 1738 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 SALL1Q9NSC2 1324 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 DEXIO95424 95 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 CLCN6P51797 869 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 PTGDRQ13258 359 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 CNNM2Q9H8M5 875 aa15.53■□□□□ 0.08
NDEL1-204ENST00000578172 PP2D1A8MPX8 630 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 MMP1P03956 469 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 KRT2P35908 639 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
NDEL1-204ENST00000578172 ERFEQ4G0M1 354 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 ACRBPQ8NEB7 543 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 DYNLL2Q96FJ2 89 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 TACC3Q9Y6A5 838 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 NEK11Q8NG66 645 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 ANKRD7Q92527 254 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 CCDC102AQ96A19 550 aa15.52■□□□□ 0.08
NDEL1-204ENST00000578172 GTPBP4Q9BZE4 634 aaKnown RBP15.52■□□□□ 0.08
NDEL1-204ENST00000578172 CACNA1FO60840 1977 aa15.52■□□□□ 0.07
NDEL1-204ENST00000578172 CDC25BP30305 580 aa15.52■□□□□ 0.07
NDEL1-204ENST00000578172 DMTNQ08495 405 aa15.52■□□□□ 0.07
NDEL1-204ENST00000578172 CCDC178Q5BJE1 867 aa15.52■□□□□ 0.07
NDEL1-204ENST00000578172 SRP68Q9UHB9 627 aaKnown RBP15.52■□□□□ 0.07
NDEL1-204ENST00000578172 PRDX5P30044 214 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 TOB1P50616 345 aaPredicted RBP15.51■□□□□ 0.07
NDEL1-204ENST00000578172 EIF5P55010 431 aaKnown RBP15.51■□□□□ 0.07
NDEL1-204ENST00000578172 RILPL1Q5EBL4 403 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 DACH1Q9UI36 760 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 PPP2R3AQ06190 1150 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CRACR2BQ8N4Y2 399 aaPredicted RBP15.51■□□□□ 0.07
NDEL1-204ENST00000578172 SLC44A5Q8NCS7 719 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 ANKRD20A12PQ8NF67 263 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CAGE1Q8TC20 777 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
NDEL1-204ENST00000578172 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CEP131Q9UPN4 1083 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 WNT7AO00755 349 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 BMP6P22004 513 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CASP14P31944 242 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 RASGRP2Q7LDG7 609 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 AGXT2Q9BYV1 514 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
NDEL1-204ENST00000578172 ENC1O14682 589 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 IDEP14735 1019 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 RBL2Q08999 1139 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 SPECC1LQ69YQ0 1117 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 NBPF5PQ86XG9 351 aaPredicted RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 CELF1Q92879 486 aaKnown RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 CCDC194A0A1B0GVG4 234 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 CTIFO43310 598 aaKnown RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 KIF5CO60282 957 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 FMNL1O95466 1100 aaPredicted RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 CSF1RP07333 972 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 DIXDC1Q155Q3 683 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 RESP18Q5W5W9 173 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
NDEL1-204ENST00000578172 SYNRGQ9UMZ2 1314 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 PTPAQ15257 358 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 IMPACTQ9P2X3 320 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 GDAQ9Y2T3 454 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 TNS3Q68CZ2 1445 aa15.5■□□□□ 0.07
NDEL1-204ENST00000578172 LOC102724428A0A0B4J2F2 783 aa15.49■□□□□ 0.07
NDEL1-204ENST00000578172 KIF2AO00139 706 aaPredicted RBP15.49■□□□□ 0.07
NDEL1-204ENST00000578172 ZMYND10O75800 440 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms