RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SF3A1Q15459 793 aaKnown RBP6.26□□□□□ -1.41
VAPA-203ENST00000577539 COX20Q5RI15 118 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
VAPA-203ENST00000577539 NKX2-3Q8TAU0 364 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 ALKBH8Q96BT7 664 aaKnown RBP6.26□□□□□ -1.41
VAPA-203ENST00000577539 SYTL4Q96C24 671 aaPredicted RBP6.26□□□□□ -1.41
VAPA-203ENST00000577539 PRR14Q9BWN1 585 aa6.26□□□□□ -1.41
VAPA-203ENST00000577539 A0A0G2JLW4 131 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 PTPDC1A2A3K4 754 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 MARCH6O60337 910 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 APPP05067 770 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 PPP4CP60510 307 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 SCRN1Q12765 414 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 MTFR1Q15390 333 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 RABL6Q3YEC7 729 aaPredicted RBP6.25□□□□□ -1.41
VAPA-203ENST00000577539 CCDC73Q6ZRK6 1079 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 STOX1Q6ZVD7 989 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 FAM161BQ96MY7 647 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 FTOQ9C0B1 505 aaKnown RBP eCLIP6.25□□□□□ -1.41
VAPA-203ENST00000577539 DNAJC25Q9H1X3 360 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 DDX19AQ9NUU7 478 aaKnown RBP6.25□□□□□ -1.41
VAPA-203ENST00000577539 CFAP45Q9UL16 551 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 MED1Q15648 1581 aaPredicted RBP6.25□□□□□ -1.41
VAPA-203ENST00000577539 ZNF609O15014 1411 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 KAT6BQ8WYB5 2073 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 GOLGA6L19H0YKK7 550 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 IGFBP4P22692 258 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 ME1P48163 572 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 ZRSR1Q15695 479 aaKnown RBP6.25□□□□□ -1.41
VAPA-203ENST00000577539 OXLD1Q5BKU9 147 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 THSD4Q6ZMP0 1018 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 C2orf49Q9BVC5 232 aaPredicted RBP6.25□□□□□ -1.41
VAPA-203ENST00000577539 CCDC87Q9NVE4 849 aa6.25□□□□□ -1.41
VAPA-203ENST00000577539 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 BECN2A8MW95 431 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 H7C1W4 665 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 CPLX1O14810 134 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 ZNF165P49910 485 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 FOXO4P98177 505 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 NAA30Q147X3 362 aaPredicted RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 OTUD7BQ6GQQ9 843 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 ETNK1Q9HBU6 452 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 MARF1Q9Y4F3 1742 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 OVOS2A0A0G2JMS6 1433 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 COL15A1P39059 1388 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 RNF113AO15541 343 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 HSPD1P10809 573 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 ADORA1P30542 326 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 CHAF1AQ13111 956 aaPredicted RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 ATG9AQ7Z3C6 839 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 LRP10Q7Z4F1 713 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 RALYLQ86SE5 291 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 CBX8Q9HC52 389 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 TMOD3Q9NYL9 352 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 A0A087WWV3 80 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 E7EWF7 191 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 AP5Z1O43299 807 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 KINO60870 393 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 PTGS1P23219 599 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 MAPK1P28482 360 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 EMP3P54852 163 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 METTL24Q5JXM2 366 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 USPL1Q5W0Q7 1092 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 KIF6Q6ZMV9 814 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 CCAR1Q8IX12 1150 aaKnown RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 CCDC191Q8NCU4 936 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 PIBF1Q8WXW3 757 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 PGBD1Q96JS3 809 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 MTRQ99707 1265 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 SDF4Q9BRK5 362 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 TSPAN10Q9H1Z9 355 aaPredicted RBP6.24□□□□□ -1.41
VAPA-203ENST00000577539 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 WWC3Q9ULE0 1092 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 MRVI1Q9Y6F6 885 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 PCDH11XQ9BZA7 1347 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 PCDH11YQ9BZA8 1340 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 KDM3BQ7LBC6 1761 aa6.24□□□□□ -1.41
VAPA-203ENST00000577539 ERVH48-1M5A8F1 160 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 ABL1P00519 1130 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 POLR3DP05423 398 aaPredicted RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 IL2RBP14784 551 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 MPSTP25325 297 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 HMGN5P82970 282 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 IFIT5Q13325 482 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 LRRFIP1Q32MZ4 808 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 PI16Q6UXB8 463 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 CCDC186Q7Z3E2 898 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 DNAJC10Q8IXB1 793 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 PIK3R5Q8WYR1 880 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 FUCA2Q9BTY2 467 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 ZSCAN16Q9H4T2 348 aaPredicted RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 HELLSQ9NRZ9 838 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 CHD2O14647 1828 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 MAST3O60307 1309 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 IDH1O75874 414 aaKnown RBP6.23□□□□□ -1.41
VAPA-203ENST00000577539 CASP7P55210 303 aa6.23□□□□□ -1.41
VAPA-203ENST00000577539 RESTQ13127 1097 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms