RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-219ENST00000576713 MYO5AQ9Y4I1 1855 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 CHGBP05060 677 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 CACNB3P54284 484 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 KCNC4Q03721 635 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 APOBEC3HQ6NTF7 200 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 TDRD3Q9H7E2 651 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 SERPINA10Q9UK55 444 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
NPLOC4-219ENST00000576713 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 LDHBP07195 334 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 UQCRFS1P1P0C7P4 283 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 MMP16P51512 607 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 MECOMQ03112 1051 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 JMYQ8N9B5 988 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 NSUN4Q96CB9 384 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 HDAC9Q9UKV0 1011 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 DAGLAQ9Y4D2 1042 aa11.57□□□□□ -0.56
NPLOC4-219ENST00000576713 CNTNAP1P78357 1384 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 SMC5Q8IY18 1101 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 ZDHHC15Q96MV8 337 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 SLC6A16Q9GZN6 736 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 ZNF70Q9UC06 446 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 FZD1Q9UP38 647 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 SUGT1Q9Y2Z0 365 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 GAKO14976 1311 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 PITPNM2Q9BZ72 1349 aa11.56□□□□□ -0.56
NPLOC4-219ENST00000576713 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 AAMPQ13685 434 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 DCPSQ96C86 337 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 CDCA5Q96FF9 252 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 BOLA2Q9H3K6 86 aa11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 POLR2AP24928 1970 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-219ENST00000576713 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 ATP5JP18859 108 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 NFIAQ12857 509 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 CDC42EP5Q6NZY7 148 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 MOB2Q70IA6 237 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 PI4K2BQ8TCG2 481 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 MRIQ9BWK5 157 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 VEZTQ9HBM0 779 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 TRPM7Q96QT4 1865 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 MROH7-TTC4A0A0A0MT08 1334 aa11.54□□□□□ -0.56
NPLOC4-219ENST00000576713 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 TCP10L2B9ZVM9 353 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 GOLIM4O00461 696 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 CELF2O95319 508 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 MMP14P50281 582 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 RHBDL3P58872 404 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 PTPRNQ16849 979 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 TEPSINQ96N21 525 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 HAUS7Q99871 368 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 LNPKQ9C0E8 428 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 LRP2BPQ9P2M1 347 aa11.53□□□□□ -0.56
NPLOC4-219ENST00000576713 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.56
NPLOC4-219ENST00000576713 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 BTDP43251 543 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 NUCB1Q02818 461 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 RASA3Q14644 834 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 NBPF12Q5TAG4 269 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 ZGPATQ8N5A5 531 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 TMEM39BQ9GZU3 492 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms