RNA–Protein interactions for RNA: ENST00000568790.5

COQ9-215, Transcript of coenzyme Q9, human

TSL 2

Gene COQ9, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COQ9-215	ENST00000568790	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
COQ9-215	ENST00000568790	ANTXR1	Q9H6X2	564 aa		27.87	■■■□□ 2.05
COQ9-215	ENST00000568790	BRCA2	P51587	3418 aa		27.87	■■■□□ 2.05
COQ9-215	ENST00000568790	USP17L10	C9JJH3	530 aa		27.86	■■■□□ 2.05
COQ9-215	ENST00000568790	FLT3LG	P49771	235 aa		27.86	■■■□□ 2.05
COQ9-215	ENST00000568790	IRF5	Q13568	498 aa		27.86	■■■□□ 2.05
COQ9-215	ENST00000568790	PXYLP1	Q8TE99	480 aa		27.86	■■■□□ 2.05
COQ9-215	ENST00000568790	FOCAD	Q5VW36	1801 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	ADCY3	O60266	1144 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	CAPN2	P17655	700 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	MTFR1	Q15390	333 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	RNF208	Q9H0X6	261 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	SERPINB13	Q9UIV8	391 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	GABRQ	Q9UN88	632 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	CDK5RAP2	Q96SN8	1893 aa		27.85	■■■□□ 2.05
COQ9-215	ENST00000568790	GJB1	P08034	283 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	CCL5	P13501	91 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	IRX3	P78415	501 aa	Predicted RBP	27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	MTMR2	Q13614	643 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	SIRT2	Q8IXJ6	389 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	EHD4	Q9H223	541 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	DNAJC18	Q9H819	358 aa		27.84	■■■□□ 2.05
COQ9-215	ENST00000568790	HOXA7	P31268	230 aa	Predicted RBP	27.83	■■■□□ 2.05
COQ9-215	ENST00000568790	SLC9C2	Q5TAH2	1124 aa		27.83	■■■□□ 2.05
COQ9-215	ENST00000568790	C20orf194	Q5TEA3	1177 aa		27.83	■■■□□ 2.05
COQ9-215	ENST00000568790	ZBTB21	Q9ULJ3	1066 aa		27.83	■■■□□ 2.05
COQ9-215	ENST00000568790	MAGEB6P1	A0A0J9YX57	407 aa		27.82	■■■□□ 2.04
COQ9-215	ENST00000568790	GDF11	O95390	407 aa		27.82	■■■□□ 2.04
COQ9-215	ENST00000568790	GJA8	P48165	433 aa		27.82	■■■□□ 2.04
COQ9-215	ENST00000568790	PDE3A	Q14432	1141 aa		27.82	■■■□□ 2.04
COQ9-215	ENST00000568790	LOC285556	D6RIA3	1793 aa		27.81	■■■□□ 2.04
COQ9-215	ENST00000568790	TATDN1	Q6P1N9	297 aa		27.81	■■■□□ 2.04
COQ9-215	ENST00000568790	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.81	■■■□□ 2.04
COQ9-215	ENST00000568790	MYH1	P12882	1939 aa		27.8	■■■□□ 2.04
COQ9-215	ENST00000568790	USP17L2	Q6R6M4	530 aa		27.8	■■■□□ 2.04
COQ9-215	ENST00000568790	DNAJC2	Q99543	621 aa	Known RBP	27.8	■■■□□ 2.04
COQ9-215	ENST00000568790	SIPA1L1	O43166	1804 aa		27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	POLR3D	P05423	398 aa	Predicted RBP	27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	PDE6A	P16499	860 aa		27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	JAG1	P78504	1218 aa		27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	CERKL	Q49MI3	558 aa	Predicted RBP	27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	RIOK1	Q9BRS2	568 aa	Known RBP	27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	CABP5	Q9NP86	173 aa		27.79	■■■□□ 2.04
COQ9-215	ENST00000568790	GOLIM4	O00461	696 aa		27.78	■■■□□ 2.04
COQ9-215	ENST00000568790	GH2	P01242	217 aa		27.78	■■■□□ 2.04
COQ9-215	ENST00000568790	MORF4L1	Q9UBU8	362 aa		27.78	■■■□□ 2.04
COQ9-215	ENST00000568790	TAOK2	Q9UL54	1235 aa		27.78	■■■□□ 2.04
COQ9-215	ENST00000568790	GPRC5A	Q8NFJ5	357 aa		27.77	■■■□□ 2.04
COQ9-215	ENST00000568790	P2RX7	Q99572	595 aa	Known RBP	27.77	■■■□□ 2.04
COQ9-215	ENST00000568790	INHA	P05111	366 aa		27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	ELN	P15502	786 aa		27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	ATP5J	P18859	108 aa		27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	USP14	P54578	494 aa		27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	ABCB5	Q2M3G0	1257 aa		27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
COQ9-215	ENST00000568790	DOCK3	Q8IZD9	2030 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	ZNF532	Q9HCE3	1301 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	SGPL1	O95470	568 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	HERVK_113	P62684	666 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	RAB3GAP1	Q15042	981 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	CCAR1	Q8IX12	1150 aa	Known RBP	27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	U2AF1L4	Q8WU68	220 aa	Known RBP	27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	FEZ1	Q99689	392 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	UNC93B1	Q9H1C4	597 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	PAG1	Q9NWQ8	432 aa		27.75	■■■□□ 2.03
COQ9-215	ENST00000568790	SHISA4	Q96DD7	197 aa		27.74	■■■□□ 2.03
COQ9-215	ENST00000568790	HTATIP2	Q9BUP3	242 aa		27.74	■■■□□ 2.03
COQ9-215	ENST00000568790	LRRCC1	Q9C099	1032 aa		27.74	■■■□□ 2.03
COQ9-215	ENST00000568790	PLCD1	P51178	756 aa		27.73	■■■□□ 2.03
COQ9-215	ENST00000568790	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.73	■■■□□ 2.03
COQ9-215	ENST00000568790	EMILIN3	Q9NT22	766 aa		27.73	■■■□□ 2.03
COQ9-215	ENST00000568790	MCM9	Q9NXL9	1143 aa		27.73	■■■□□ 2.03
COQ9-215	ENST00000568790	TFRC	P02786	760 aa	Known RBP	27.72	■■■□□ 2.03
COQ9-215	ENST00000568790	DPF3	Q92784	378 aa		27.72	■■■□□ 2.03
COQ9-215	ENST00000568790	C12orf42	Q96LP6	360 aa		27.72	■■■□□ 2.03
COQ9-215	ENST00000568790	BOLA2	Q9H3K6	86 aa		27.72	■■■□□ 2.03
COQ9-215	ENST00000568790	GJD2	Q9UKL4	321 aa		27.72	■■■□□ 2.03
COQ9-215	ENST00000568790	TCRBV5S4A2T	A0A5A2	114 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L15	C9J2P7	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L13	C9JLJ4	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L11	C9JVI0	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L18	D6R9N7	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L22	D6RA61	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L17	D6RBQ6	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L19	D6RCP7	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L20	D6RJB6	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	HMGCR	P04035	888 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	MAPK4	P31152	587 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	USP17L24	Q0WX57	530 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	EDC3	Q96F86	508 aa	Known RBP	27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	HAUS7	Q99871	368 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	KIAA1683	Q9H0B3	1180 aa		27.71	■■■□□ 2.03
COQ9-215	ENST00000568790	SHMT1	P34896	483 aa		27.7	■■■□□ 2.02
COQ9-215	ENST00000568790	NUDT12	Q9BQG2	462 aa		27.7	■■■□□ 2.02
COQ9-215	ENST00000568790	ATP8A2	Q9NTI2	1148 aa		27.7	■■■□□ 2.02
COQ9-215	ENST00000568790	RBPJL	Q9UBG7	517 aa		27.7	■■■□□ 2.02
COQ9-215	ENST00000568790	HABP4	Q5JVS0	413 aa	Known RBP	27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	ZSCAN25	Q6NSZ9	544 aa		27.69	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms