RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
SPG7-218ENST00000568205 E7EWF7 191 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 AKR1B1P15121 316 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 VGLL4Q14135 290 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 ABCB5Q2M3G0 1257 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 RRP12Q5JTH9 1297 aaKnown RBP18.6■□□□□ 0.57
SPG7-218ENST00000568205 NOL9Q5SY16 702 aaKnown RBP18.6■□□□□ 0.57
SPG7-218ENST00000568205 ZNF444Q8N0Y2 327 aaPredicted RBP18.6■□□□□ 0.57
SPG7-218ENST00000568205 ZKSCAN4Q969J2 545 aaPredicted RBP18.6■□□□□ 0.57
SPG7-218ENST00000568205 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 CSADQ9Y600 493 aa18.6■□□□□ 0.57
SPG7-218ENST00000568205 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 UNCXA6NJT0 531 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 RANBP6O60518 1105 aaKnown RBP18.59■□□□□ 0.57
SPG7-218ENST00000568205 APLP1P51693 650 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 HUNKP57058 714 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 JAG1P78504 1218 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
SPG7-218ENST00000568205 TSGA10IPQ3SY00 556 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 SCYL3Q8IZE3 742 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 KRT23Q9C075 422 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 GINM1Q9NU53 330 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 ZBTB21Q9ULJ3 1066 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 SNX14Q9Y5W7 946 aa18.59■□□□□ 0.57
SPG7-218ENST00000568205 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
SPG7-218ENST00000568205 GH2P01242 217 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 ASNSP08243 561 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 NT5C2P49902 561 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 TRDNQ13061 729 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 KRT32Q14532 448 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 FAM47AQ5JRC9 791 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
SPG7-218ENST00000568205 SAPCD2Q86UD0 394 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 ESR2Q92731 530 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
SPG7-218ENST00000568205 CABP5Q9NP86 173 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 SNCAIPQ9Y6H5 919 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
SPG7-218ENST00000568205 TSPY2A6NKD2 308 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 B4E1Z4 1266 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 KDM4AO75164 1064 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 TSPY3P0CV98 308 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 TSPY8P0CW00 308 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 TFAP4Q01664 338 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 TMEM179Q6ZVK1 233 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 NKX2-3Q8TAU0 364 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 ELP3Q9H9T3 547 aa18.57■□□□□ 0.56
SPG7-218ENST00000568205 ABT1Q9ULW3 272 aaKnown RBP18.57■□□□□ 0.56
SPG7-218ENST00000568205 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
SPG7-218ENST00000568205 NEDD1Q8NHV4 660 aa18.56■□□□□ 0.56
SPG7-218ENST00000568205 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
SPG7-218ENST00000568205 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
SPG7-218ENST00000568205 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
SPG7-218ENST00000568205 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.56■□□□□ 0.56
SPG7-218ENST00000568205 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
SPG7-218ENST00000568205 PTPRAP18433 802 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 GUCY1A2P33402 732 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 ANAPC15P60006 121 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 SEPT2Q15019 361 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 RAB3GAP1Q15042 981 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
SPG7-218ENST00000568205 SLC10A4Q96EP9 437 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 NEK1Q96PY6 1258 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 C22orf23Q9BZE7 217 aa18.55■□□□□ 0.56
SPG7-218ENST00000568205 IGKV6D-41A0A0C4DH26 115 aa18.54■□□□□ 0.56
SPG7-218ENST00000568205 SPDYE5A6NIY4 337 aa18.54■□□□□ 0.56
SPG7-218ENST00000568205 C1QTNF8P60827 252 aa18.54■□□□□ 0.56
SPG7-218ENST00000568205 CCDC84Q86UT8 332 aaPredicted RBP18.54■□□□□ 0.56
SPG7-218ENST00000568205 ERO1BQ86YB8 467 aa18.54■□□□□ 0.56
SPG7-218ENST00000568205 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
SPG7-218ENST00000568205 USP17L5A8MUK1 530 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 RGMBQ6NW40 437 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 CYB5R4Q7L1T6 521 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 CLEC10AQ8IUN9 316 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 IL17RAQ96F46 866 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 HHIPL1Q96JK4 782 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 KANSL2Q9H9L4 492 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 ZSWIM5Q9P217 1185 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 ZHX2Q9Y6X8 837 aa18.53■□□□□ 0.56
SPG7-218ENST00000568205 NMT2O60551 498 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 PSMA5P28066 241 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
SPG7-218ENST00000568205 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
SPG7-218ENST00000568205 ANTXR2P58335 489 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 ICA1Q05084 483 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 PPATQ06203 517 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.56
SPG7-218ENST00000568205 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 OPTNQ96CV9 577 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 OTUD5Q96G74 571 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 CEP95Q96GE4 821 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 MTMR4Q9NYA4 1195 aa18.52■□□□□ 0.56
SPG7-218ENST00000568205 OTOFQ9HC10 1997 aa18.51■□□□□ 0.55
SPG7-218ENST00000568205 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms