RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RPS6KB1P23443 525 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 DHX32Q7L7V1 743 aaKnown RBP15.25■□□□□ 0.03
SPG7-209ENST00000564047 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
SPG7-209ENST00000564047 MB21D2Q8IYB1 491 aaPredicted RBP15.25■□□□□ 0.03
SPG7-209ENST00000564047 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 DYNLL2Q96FJ2 89 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 CSRNP1Q96S65 589 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 UPF3BQ9BZI7 483 aaKnown RBP15.25■□□□□ 0.03
SPG7-209ENST00000564047 TMEM39BQ9GZU3 492 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
SPG7-209ENST00000564047 LAMB1P07942 1786 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 BAZ2AQ9UIF9 1905 aaKnown RBP15.24■□□□□ 0.03
SPG7-209ENST00000564047 CDK8P49336 464 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 NEK4P51957 841 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 ESR2Q92731 530 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 DCPSQ96C86 337 aaKnown RBP15.24■□□□□ 0.03
SPG7-209ENST00000564047 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
SPG7-209ENST00000564047 HERC5Q9UII4 1024 aaKnown RBP15.24■□□□□ 0.03
SPG7-209ENST00000564047 WDR19Q8NEZ3 1342 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 B4E1Z4 1266 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 TBC1D12O60347 775 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 MCM5P33992 734 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 EXOSC10Q01780 885 aaKnown RBP15.23■□□□□ 0.03
SPG7-209ENST00000564047 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
SPG7-209ENST00000564047 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
SPG7-209ENST00000564047 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
SPG7-209ENST00000564047 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 ALDH8A1Q9H2A2 487 aaPredicted RBP15.23■□□□□ 0.03
SPG7-209ENST00000564047 TLL2Q9Y6L7 1015 aa15.23■□□□□ 0.03
SPG7-209ENST00000564047 MYH1P12882 1939 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 ST18O60284 1047 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 AOC2O75106 756 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 KDM4AO75164 1064 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 PRDM1O75626 825 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 CPA1P15085 419 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 RASA1P20936 1047 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 MAP3K10Q02779 954 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 DGKZQ13574 1117 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 COL9A3Q14050 684 aaPredicted RBP15.22■□□□□ 0.03
SPG7-209ENST00000564047 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 HOOK2Q96ED9 719 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 TTC14Q96N46 770 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 MTA3Q9BTC8 594 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 PDRG1Q9NUG6 133 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 ZSWIM5Q9P217 1185 aa15.22■□□□□ 0.03
SPG7-209ENST00000564047 PRC1O43663 620 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 RANBP6O60518 1105 aaKnown RBP15.21■□□□□ 0.03
SPG7-209ENST00000564047 SHMT1P34896 483 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 ANTXR2P58335 489 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPG7-209ENST00000564047 CST9Q5W186 159 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 FBXL16Q8N461 479 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
SPG7-209ENST00000564047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPG7-209ENST00000564047 SCAF8Q9UPN6 1271 aaKnown RBP15.21■□□□□ 0.03
SPG7-209ENST00000564047 TSPY2A6NKD2 308 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 MCM2P49736 904 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 SNX21Q969T3 373 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 CCDC17Q96LX7 622 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
SPG7-209ENST00000564047 TRAF5O00463 557 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 TFAP4Q01664 338 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
SPG7-209ENST00000564047 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 FAM47AQ5JRC9 791 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
SPG7-209ENST00000564047 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 CDC37L1Q7L3B6 337 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 TCEANC2Q96MN5 208 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
SPG7-209ENST00000564047 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 FAM196BA6NMK8 535 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 SLURP2P0DP57 97 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 AK2P54819 239 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 FGD1P98174 961 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
SPG7-209ENST00000564047 CCDC178Q5BJE1 867 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 Q6ZUG5 572 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 SAPCD2Q86UD0 394 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 IGDCC4Q8TDY8 1250 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
SPG7-209ENST00000564047 UBAC1Q9BSL1 405 aa15.18■□□□□ 0.02
SPG7-209ENST00000564047 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms