RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 SMC6Q96SB8 1091 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 CASQ2O14958 399 aaPredicted RBP17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 PARD6BQ9BYG5 372 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 PSEN1P49768 467 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 TFCP2Q12800 502 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 SYCP3Q8IZU3 236 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 NLRP1Q9C000 1473 aa17.09■□□□□ 0.33
AC004943.2-201ENST00000563328 ALDH3A1P30838 453 aa17.08■□□□□ 0.33
AC004943.2-201ENST00000563328 NOP2P46087 812 aaKnown RBP17.08■□□□□ 0.33
AC004943.2-201ENST00000563328 ZBTB16Q05516 673 aa17.08■□□□□ 0.33
AC004943.2-201ENST00000563328 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.33
AC004943.2-201ENST00000563328 ARHGEF2Q92974 986 aaKnown RBP17.08■□□□□ 0.33
AC004943.2-201ENST00000563328 RFC4P35249 363 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 PARP9Q8IXQ6 854 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 RAB3IPQ96QF0 476 aaPredicted RBP17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 GUCA1BQ9UMX6 200 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 PCYT1AP49585 367 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 RUFY3Q7L099 469 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 THOC1Q96FV9 657 aaKnown RBP17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 ARHGEF10O15013 1369 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 SPECC1L-ADORA2AF8WAN1 911 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 MIEF2Q96C03 454 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 ZC4H2Q9NQZ6 224 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 PSD3Q9NYI0 1048 aa17.08■□□□□ 0.32
AC004943.2-201ENST00000563328 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 SCRN1Q12765 414 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 CFAP157Q5JU67 520 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 PACS2Q86VP3 889 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 WDR75Q8IWA0 830 aaKnown RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 TLDC2A0PJX2 215 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 TIMM10P62072 90 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 SYNMO15061 1565 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 KRT86O43790 486 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 SGSM3Q96HU1 749 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 TTC41PQ6P2S7 1318 aa17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 ZNF189O75820 626 aaPredicted RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
AC004943.2-201ENST00000563328 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 TULP2O00295 520 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 SLC4A8Q2Y0W8 1093 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 BICD1Q96G01 975 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 GSTTP1A0A1W2PQM5 241 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 SH3BP1Q9Y3L3 701 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 TSC22D4Q9Y3Q8 395 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 USP6P35125 1406 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 PPP1R9AQ9ULJ8 1098 aa17.06■□□□□ 0.32
AC004943.2-201ENST00000563328 ADCY2Q08462 1091 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 DAAM1Q9Y4D1 1078 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 TXNDC9O14530 226 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 USP5P45974 858 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 FGD4Q96M96 766 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 CYLC1P35663 651 aaPredicted RBP17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 HOXB7P09629 217 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
AC004943.2-201ENST00000563328 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 SKIP12755 728 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 CHMLP26374 656 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 METTL22Q9BUU2 404 aaPredicted RBP17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 HGSO14964 777 aaPredicted RBP17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 ZNF131P52739 623 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 SF3A3Q12874 501 aaKnown RBP eCLIP17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 BRF1Q92994 677 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 GMNNO75496 209 aa17.04■□□□□ 0.32
AC004943.2-201ENST00000563328 ARHGAP22Q7Z5H3 698 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms