RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 PICK1Q9NRD5 415 aa6.99□□□□□ -1.29
CNOT1-203ENST00000562046 TNFRSF10CO14798 259 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 GAS2O43903 313 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 RNGTTO60942 597 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 ACRP10323 421 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 NME1P15531 152 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 USP11P51784 963 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 CASP7P55210 303 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 RASSF7Q02833 373 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 MLECQ14165 292 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 INTS3Q68E01 1043 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 SEZ6L2Q6UXD5 910 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 ANKS3Q6ZW76 656 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 FAM20CQ8IXL6 584 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 C19orf47Q8N9M1 422 aaKnown RBP6.98□□□□□ -1.29
CNOT1-203ENST00000562046 FBLIM1Q8WUP2 373 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 PSMG3-AS1Q96PY0 264 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 TM9SF2Q99805 663 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 PCOLCE2Q9UKZ9 415 aa6.98□□□□□ -1.29
CNOT1-203ENST00000562046 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-203ENST00000562046 CST3P01034 146 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-203ENST00000562046 NFICP08651 508 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 BMP3P12645 472 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 RAB6AP20340 208 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 SERINC3Q13530 473 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 ARSHQ5FYA8 562 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 NBPF6Q5VWK0 638 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 CDC37L1Q7L3B6 337 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 NLRC3Q7RTR2 1065 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
CNOT1-203ENST00000562046 NBPF4Q96M43 638 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 TNKS2Q9H2K2 1166 aa6.97□□□□□ -1.29
CNOT1-203ENST00000562046 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 MAP4P27816 1152 aaKnown RBP6.96□□□□□ -1.3
CNOT1-203ENST00000562046 TNNI3KQ59H18 835 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 SOGA3Q5TF21 947 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT1-203ENST00000562046 CKAP2LQ8IYA6 745 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 FAM13CQ8NE31 585 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 HNRNPLLQ8WVV9 542 aaKnown RBP6.96□□□□□ -1.3
CNOT1-203ENST00000562046 SLC9A7Q96T83 725 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 FOXQ1Q9C009 403 aa6.96□□□□□ -1.3
CNOT1-203ENST00000562046 A0A1W2PQH9 124 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 LRIG2O94898 1065 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 YARSP54577 528 aaKnown RBP6.95□□□□□ -1.3
CNOT1-203ENST00000562046 RAB33AQ14088 237 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 ZYXQ15942 572 aaKnown RBP6.95□□□□□ -1.3
CNOT1-203ENST00000562046 ARMCX6Q7L4S7 300 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 TTC6Q86TZ1 520 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-203ENST00000562046 C1GALT1Q9NS00 363 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 DAGLAQ9Y4D2 1042 aa6.95□□□□□ -1.3
CNOT1-203ENST00000562046 RGS13O14921 159 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 GATA4P43694 442 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 UNC5AQ6ZN44 842 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 YIPF2Q9BWQ6 316 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 SSU72Q9NP77 194 aaKnown RBP6.94□□□□□ -1.3
CNOT1-203ENST00000562046 LTBP3Q9NS15 1303 aa6.94□□□□□ -1.3
CNOT1-203ENST00000562046 COL17A1Q9UMD9 1497 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-203ENST00000562046 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
CNOT1-203ENST00000562046 UBOX5O94941 541 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 POLR2BP30876 1174 aaKnown RBP6.93□□□□□ -1.3
CNOT1-203ENST00000562046 CCNFP41002 786 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 MAP7Q14244 749 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 BEND4Q6ZU67 534 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 CLEC10AQ8IUN9 316 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 CELF2-AS1Q8N7Q2 184 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 MFSD2AQ8NA29 543 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 GATA6Q92908 595 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 FAM83CQ9BQN1 747 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 LGR6Q9HBX8 967 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 ACTR10Q9NZ32 417 aa6.93□□□□□ -1.3
CNOT1-203ENST00000562046 RAG1P15918 1043 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 RXRBP28702 533 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 CCDC144BQ3MJ40 725 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 DNAJB8Q8NHS0 232 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-203ENST00000562046 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 CCDC74BQ96LY2 380 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 KIF2CQ99661 725 aa6.92□□□□□ -1.3
CNOT1-203ENST00000562046 LOC105371045A0A1W2PR82 267 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 SLITRK5O94991 958 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 GDF11O95390 407 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 NFKBIBQ15653 356 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 OSBPL2Q9H1P3 480 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms