RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 RNF10Q8N5U6 811 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 NUP58Q9BVL2 599 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 RIMBP2O15034 1052 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CNNM4Q6P4Q7 775 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 IFIH1Q9BYX4 1025 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 AOX1Q06278 1338 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 KSR1Q8IVT5 923 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 TEX13AQ9BXU3 409 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 FAM207AQ9NSI2 230 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CCNT1O60563 726 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 RPUSD2Q8IZ73 545 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 USP28Q96RU2 1077 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 VCXQ9H320 206 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 ASIC3Q9UHC3 531 aa11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 ANGEL1Q9UNK9 670 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-202ENST00000561623 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 PTH1RQ03431 593 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 RPAINQ86UA6 219 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 TBC1D7Q9P0N9 293 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 GOLGA8KD6RF30 607 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 FMNL3Q8IVF7 1028 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 UIMC1Q96RL1 719 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 ARMT1Q9H993 441 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 CUL7Q14999 1698 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 PPFIA4O75335 1185 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 FAM71BQ8TC56 605 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 A0A087WWV3 80 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 GNA11P29992 359 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 RPS6KA1Q15418 735 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 VWA3BQ502W6 1294 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 TTC6Q86TZ1 520 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 COL17A1Q9UMD9 1497 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 INF2Q27J81 1249 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 TMCO4Q5TGY1 634 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 HHATQ5VTY9 493 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 KCTD16Q68DU8 428 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 PPP1R21Q6ZMI0 780 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 ZNF354CQ86Y25 554 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 MRFAP1L1Q96HT8 127 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 VCX3BQ9H321 246 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 RPSAP08865 295 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 RRAGAQ7L523 313 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 CEP120Q8N960 986 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
GTF3C1-202ENST00000561623 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 RPL13P26373 211 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 TXKP42681 527 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 PSMD6Q15008 389 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 DENND2CQ68D51 928 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 ADALQ6DHV7 355 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC62Q6P9F0 684 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 GPATCH8Q9UKJ3 1502 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 BUB1O43683 1085 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 MTMR3Q13615 1198 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 LRCH2Q5VUJ6 765 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 UBL4BQ8N7F7 174 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 FRMD4BQ9Y2L6 1034 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 FAM169AQ9Y6X4 670 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 NDC80O14777 642 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 CLTAP09496 248 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 EYA1Q99502 592 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 TCHPQ9BT92 498 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 FAN1Q9Y2M0 1017 aa11.34□□□□□ -0.59
GTF3C1-202ENST00000561623 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
GTF3C1-202ENST00000561623 PDE1CQ14123 709 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-202ENST00000561623 CLUL1Q15846 466 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms