RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 TFRCP02786 760 aaKnown RBP21.25■□□□□ 0.99
CRTC3-208ENST00000560098 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
CRTC3-208ENST00000560098 HOXA7P31268 230 aaPredicted RBP21.25■□□□□ 0.99
CRTC3-208ENST00000560098 IRX3P78415 501 aaPredicted RBP21.25■□□□□ 0.99
CRTC3-208ENST00000560098 CHRDL2Q6WN34 429 aa21.25■□□□□ 0.99
CRTC3-208ENST00000560098 MORF4L1Q9UBU8 362 aa21.25■□□□□ 0.99
CRTC3-208ENST00000560098 SAP30BPQ9UHR5 308 aaKnown RBP21.25■□□□□ 0.99
CRTC3-208ENST00000560098 C19orf81C9J6K1 198 aa21.24■□□□□ 0.99
CRTC3-208ENST00000560098 SHROOM1Q2M3G4 852 aaPredicted RBP21.24■□□□□ 0.99
CRTC3-208ENST00000560098 CEP85Q6P2H3 762 aa21.24■□□□□ 0.99
CRTC3-208ENST00000560098 GJD2Q9UKL4 321 aa21.24■□□□□ 0.99
CRTC3-208ENST00000560098 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
CRTC3-208ENST00000560098 NR2E3Q9Y5X4 410 aa21.24■□□□□ 0.99
CRTC3-208ENST00000560098 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
CRTC3-208ENST00000560098 CERS3Q8IU89 383 aa21.23■□□□□ 0.99
CRTC3-208ENST00000560098 P2RX7Q99572 595 aaKnown RBP21.23■□□□□ 0.99
CRTC3-208ENST00000560098 CRISPLD2Q9H0B8 497 aa21.23■□□□□ 0.99
CRTC3-208ENST00000560098 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
CRTC3-208ENST00000560098 HMGCRP04035 888 aa21.22■□□□□ 0.99
CRTC3-208ENST00000560098 MIER1Q8N108 512 aa21.22■□□□□ 0.99
CRTC3-208ENST00000560098 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
CRTC3-208ENST00000560098 MIGA1Q8NAN2 632 aa21.22■□□□□ 0.99
CRTC3-208ENST00000560098 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.22■□□□□ 0.99
CRTC3-208ENST00000560098 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
CRTC3-208ENST00000560098 HERVK_113P62684 666 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 EXOC6BQ9Y2D4 811 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
CRTC3-208ENST00000560098 USP5P45974 858 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 MAP3K12Q12852 859 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 AACSQ86V21 672 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 GPRC5AQ8NFJ5 357 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
CRTC3-208ENST00000560098 RBM27Q9P2N5 1060 aaKnown RBP21.21■□□□□ 0.99
CRTC3-208ENST00000560098 RANBP2P49792 3224 aaKnown RBP21.2■□□□□ 0.98
CRTC3-208ENST00000560098 DOCK3Q8IZD9 2030 aa21.2■□□□□ 0.98
CRTC3-208ENST00000560098 TATDN1Q6P1N9 297 aa21.2■□□□□ 0.98
CRTC3-208ENST00000560098 TMED8Q6PL24 325 aaPredicted RBP21.2■□□□□ 0.98
CRTC3-208ENST00000560098 TXNRD2Q9NNW7 524 aa21.2■□□□□ 0.98
CRTC3-208ENST00000560098 RPTORQ8N122 1335 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 EVI5O60447 810 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 GH2P01242 217 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 PANK1Q8TE04 598 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 PAWRQ96IZ0 340 aaKnown RBP21.19■□□□□ 0.98
CRTC3-208ENST00000560098 EHD4Q9H223 541 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 HMX1Q9NP08 348 aaPredicted RBP21.19■□□□□ 0.98
CRTC3-208ENST00000560098 EMILIN3Q9NT22 766 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
CRTC3-208ENST00000560098 PEX10O60683 326 aa21.18■□□□□ 0.98
CRTC3-208ENST00000560098 TRIM32Q13049 653 aa21.18■□□□□ 0.98
CRTC3-208ENST00000560098 GTF3C2Q8WUA4 911 aaPredicted RBP21.18■□□□□ 0.98
CRTC3-208ENST00000560098 SERPINB13Q9UIV8 391 aa21.18■□□□□ 0.98
CRTC3-208ENST00000560098 CYP2B6P20813 491 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 NECAB2Q7Z6G3 386 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 TTC6Q86TZ1 520 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 ANKLE1Q8NAG6 615 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 SOCS4Q8WXH5 440 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 TRIB2Q92519 343 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 NUDT12Q9BQG2 462 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 PRO3102Q9H379 93 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 TRIOBPQ9H2D6 2365 aa21.17■□□□□ 0.98
CRTC3-208ENST00000560098 ZBED9Q6R2W3 1325 aa21.16■□□□□ 0.98
CRTC3-208ENST00000560098 MAPK4P31152 587 aa21.16■□□□□ 0.98
CRTC3-208ENST00000560098 ERVK-9P63128 1117 aa21.16■□□□□ 0.98
CRTC3-208ENST00000560098 ERVK-24P63145 666 aa21.16■□□□□ 0.98
CRTC3-208ENST00000560098 SZT2Q5T011 3432 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 XRCC5P13010 732 aaKnown RBP21.15■□□□□ 0.98
CRTC3-208ENST00000560098 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 Q3C1V9 767 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 CERKLQ49MI3 558 aaPredicted RBP21.15■□□□□ 0.98
CRTC3-208ENST00000560098 CCAR1Q8IX12 1150 aaKnown RBP21.15■□□□□ 0.98
CRTC3-208ENST00000560098 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 DIS3LQ8TF46 1054 aaKnown RBP21.15■□□□□ 0.98
CRTC3-208ENST00000560098 C12orf42Q96LP6 360 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 FEZ1Q99689 392 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 RIOK1Q9BRS2 568 aaKnown RBP21.15■□□□□ 0.98
CRTC3-208ENST00000560098 PAGR1Q9BTK6 254 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 IL1RAPL2Q9NP60 686 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 PLXNB2O15031 1838 aa21.15■□□□□ 0.98
CRTC3-208ENST00000560098 RAB3GAP1Q15042 981 aa21.14■□□□□ 0.98
CRTC3-208ENST00000560098 TTF1Q15361 905 aaPredicted RBP21.14■□□□□ 0.98
CRTC3-208ENST00000560098 MAP3K21Q5TCX8 1036 aa21.14■□□□□ 0.98
CRTC3-208ENST00000560098 PORCNQ9H237 461 aa21.14■□□□□ 0.98
CRTC3-208ENST00000560098 MYH1P12882 1939 aa21.14■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L15C9J2P7 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L13C9JLJ4 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L11C9JVI0 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L18D6R9N7 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L22D6RA61 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L17D6RBQ6 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L19D6RCP7 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L20D6RJB6 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 MS4A1P11836 297 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP14P54578 494 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 USP17L24Q0WX57 530 aa21.13■□□□□ 0.97
CRTC3-208ENST00000560098 ZYXQ15942 572 aaKnown RBP21.13■□□□□ 0.97
CRTC3-208ENST00000560098 ABCB5Q2M3G0 1257 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms