RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 JAG1P78504 1218 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 CERKLQ49MI3 558 aaPredicted RBP25.77■■□□□ 1.72
SNX1-206ENST00000559389 ERO1BQ86YB8 467 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 TBC1D10CQ8IV04 446 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 STK11IPQ8N1F8 1099 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 CCDC102AQ96A19 550 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 OPTNQ96CV9 577 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 WNK4Q96J92 1243 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 CAPNS2Q96L46 248 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 PICK1Q9NRD5 415 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 GINM1Q9NU53 330 aa25.77■■□□□ 1.72
SNX1-206ENST00000559389 ASNSP08243 561 aa25.76■■□□□ 1.71
SNX1-206ENST00000559389 RASA1P20936 1047 aa25.76■■□□□ 1.71
SNX1-206ENST00000559389 ECE1P42892 770 aa25.76■■□□□ 1.71
SNX1-206ENST00000559389 IMMTQ16891 758 aaKnown RBP25.76■■□□□ 1.71
SNX1-206ENST00000559389 CNKSR2Q8WXI2 1034 aa25.76■■□□□ 1.71
SNX1-206ENST00000559389 ZNF287Q9HBT7 754 aa25.76■■□□□ 1.71
SNX1-206ENST00000559389 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.76■■□□□ 1.71
SNX1-206ENST00000559389 RBM8AQ9Y5S9 174 aaKnown RBP25.76■■□□□ 1.71
SNX1-206ENST00000559389 ZNF213O14771 459 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 GH2P01242 217 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 PTPRAP18433 802 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 GJA5P36382 358 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 PDE4BQ07343 736 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 ABCB5Q2M3G0 1257 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 SPRYD7Q5W111 196 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 STAG1Q8WVM7 1258 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 OTUD5Q96G74 571 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 CCDC17Q96LX7 622 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.75■■□□□ 1.71
SNX1-206ENST00000559389 TACC3Q9Y6A5 838 aa25.75■■□□□ 1.71
SNX1-206ENST00000559389 PLIN4Q96Q06 1357 aa25.74■■□□□ 1.71
SNX1-206ENST00000559389 PRDM1O75626 825 aa25.74■■□□□ 1.71
SNX1-206ENST00000559389 FGRP09769 529 aa25.74■■□□□ 1.71
SNX1-206ENST00000559389 ZBTB48P10074 688 aaPredicted RBP25.74■■□□□ 1.71
SNX1-206ENST00000559389 AKR1B1P15121 316 aa25.74■■□□□ 1.71
SNX1-206ENST00000559389 MKNK2Q9HBH9 465 aa25.74■■□□□ 1.71
SNX1-206ENST00000559389 REC8O95072 547 aa25.73■■□□□ 1.71
SNX1-206ENST00000559389 PCP11498 1178 aaKnown RBP25.73■■□□□ 1.71
SNX1-206ENST00000559389 VEGFBP49765 207 aa25.73■■□□□ 1.71
SNX1-206ENST00000559389 PPATQ06203 517 aa25.73■■□□□ 1.71
SNX1-206ENST00000559389 PPIL2Q13356 520 aa25.73■■□□□ 1.71
SNX1-206ENST00000559389 AKNAD1Q5T1N1 836 aa25.73■■□□□ 1.71
SNX1-206ENST00000559389 CCDC84Q86UT8 332 aaPredicted RBP25.73■■□□□ 1.71
SNX1-206ENST00000559389 WDR33Q9C0J8 1336 aaKnown RBP25.72■■□□□ 1.71
SNX1-206ENST00000559389 ORC4O43929 436 aa25.72■■□□□ 1.71
SNX1-206ENST00000559389 CYP21A2P08686 494 aa25.72■■□□□ 1.71
SNX1-206ENST00000559389 GRM1Q13255 1194 aa25.72■■□□□ 1.71
SNX1-206ENST00000559389 TMEM179Q6ZVK1 233 aa25.72■■□□□ 1.71
SNX1-206ENST00000559389 RNF41Q9H4P4 317 aaPredicted RBP25.72■■□□□ 1.71
SNX1-206ENST00000559389 PTPRFP10586 1907 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 NEDD4P46934 1319 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 GUCY1A2P33402 732 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 NOGQ13253 232 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 TBC1D2Q9BYX2 928 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 CABP5Q9NP86 173 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 INCENPQ9NQS7 918 aa25.71■■□□□ 1.71
SNX1-206ENST00000559389 USP17L5A8MUK1 530 aa25.7■■□□□ 1.7
SNX1-206ENST00000559389 MPHOSPH10O00566 681 aaKnown RBP25.7■■□□□ 1.7
SNX1-206ENST00000559389 MKRN3Q13064 507 aaKnown RBP25.7■■□□□ 1.7
SNX1-206ENST00000559389 NECTIN1Q15223 517 aa25.7■■□□□ 1.7
SNX1-206ENST00000559389 DNAJC5GQ8N7S2 189 aa25.7■■□□□ 1.7
SNX1-206ENST00000559389 ZHX2Q9Y6X8 837 aa25.7■■□□□ 1.7
SNX1-206ENST00000559389 IRF6O14896 467 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 SEPT2Q15019 361 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 MFSD6Q6ZSS7 791 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 ZNF444Q8N0Y2 327 aaPredicted RBP25.69■■□□□ 1.7
SNX1-206ENST00000559389 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.69■■□□□ 1.7
SNX1-206ENST00000559389 KCNH4Q9UQ05 1017 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 AFG3L2Q9Y4W6 797 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 LOC285556D6RIA3 1793 aa25.69■■□□□ 1.7
SNX1-206ENST00000559389 EPB41L2O43491 1005 aaKnown RBP25.68■■□□□ 1.7
SNX1-206ENST00000559389 AOC2O75106 756 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 RAB3GAP1Q15042 981 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 C8orf34Q49A92 452 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 WDR18Q9BV38 432 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 AS3MTQ9HBK9 375 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 TAF6LQ9Y6J9 622 aa25.68■■□□□ 1.7
SNX1-206ENST00000559389 IGKV6D-41A0A0C4DH26 115 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 SLC27A2O14975 620 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 NT5C2P49902 561 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 CREB3L3Q68CJ9 461 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 CLEC10AQ8IUN9 316 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 NEDD1Q8NHV4 660 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 ZIC5Q96T25 663 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 TOMM22Q9NS69 142 aa25.67■■□□□ 1.7
SNX1-206ENST00000559389 TSPY3P0CV98 308 aa25.66■■□□□ 1.7
SNX1-206ENST00000559389 TSPY8P0CW00 308 aa25.66■■□□□ 1.7
SNX1-206ENST00000559389 FAM47AQ5JRC9 791 aa25.66■■□□□ 1.7
SNX1-206ENST00000559389 RRP12Q5JTH9 1297 aaKnown RBP25.66■■□□□ 1.7
SNX1-206ENST00000559389 ZNF280CQ8ND82 737 aa25.66■■□□□ 1.7
SNX1-206ENST00000559389 MANSC4A6NHS7 340 aaPredicted RBP25.65■■□□□ 1.7
SNX1-206ENST00000559389 TSPY2A6NKD2 308 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 CXCL11O14625 94 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 MAP2K2P36507 400 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 TFAP4Q01664 338 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 ICA1Q05084 483 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 SNAPC2Q13487 334 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 STOX1Q6ZVD7 989 aa25.65■■□□□ 1.7
SNX1-206ENST00000559389 NKX2-3Q8TAU0 364 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms