RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	AS3MT	Q9HBK9	375 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	TMOD4	Q9NZQ9	345 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	RBPJL	Q9UBG7	517 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	DOCK1	Q14185	1865 aa		11.83	□□□□□ -0.52
PABPN1-208	ENST00000557702	GRM8	O00222	908 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	MYCN	P04198	464 aa	Predicted RBP	11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	CLTB	P09497	229 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	TLE2	Q04725	743 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	PBX4	Q9BYU1	374 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	FLRT1	Q9NZU1	646 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	ADAMTS8	Q9UP79	889 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	KIF16B	Q96L93	1317 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	RLF	Q13129	1914 aa		11.82	□□□□□ -0.52
PABPN1-208	ENST00000557702	FRMPD3	Q5JV73	1810 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	KIAA0355	O15063	1070 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	ADCYAP1R1	P41586	468 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	TFF2	Q03403	129 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	PICALM	Q13492	652 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	TWISTNB	Q3B726	338 aa	Predicted RBP	11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	BEND3	Q5T5X7	828 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	FERMT2	Q96AC1	680 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	PAGR1	Q9BTK6	254 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	DOCK2	Q92608	1830 aa		11.81	□□□□□ -0.52
PABPN1-208	ENST00000557702	LOC285556	D6RIA3	1793 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	CYP2C19	P33261	490 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	CAP2	P40123	477 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	PBX2	P40425	430 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	BACE1	P56817	501 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	MTMR2	Q13614	643 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	RALBP1	Q15311	655 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	PUM3	Q15397	648 aa	Known RBP	11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	LRRC24	Q50LG9	513 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	VGLL2	Q8N8G2	317 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	TRPV1	Q8NER1	839 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	DDX4	Q9NQI0	724 aa	Known RBP	11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	TMEM39A	Q9NV64	488 aa		11.8	□□□□□ -0.52
PABPN1-208	ENST00000557702	XIRP2	A4UGR9	3374 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	FAM86C2P	A6NEL3	165 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	SLC15A5	A6NIM6	579 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	FAM196B	A6NMK8	535 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	C19orf81	C9J6K1	198 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	CYBA	P13498	195 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	KCNQ1	P51787	676 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	CCNA1	P78396	465 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	WDR78	Q5VTH9	848 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	C11orf16	Q9NQ32	467 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	MSRA	Q9UJ68	235 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	NDUFB9	Q9Y6M9	179 aa		11.79	□□□□□ -0.52
PABPN1-208	ENST00000557702	GRXCR1	A8MXD5	290 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702		F6X3S4	739 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	SMIM22	K7EJ46	135 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	APAF1	O14727	1248 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	HOXC6	P09630	235 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	PTPRE	P23469	700 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	SKIV2L	Q15477	1246 aa	Known RBP	11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	ANO1	Q5XXA6	986 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	CCDC174	Q6PII3	467 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	TSR2	Q969E8	191 aa	Known RBP	11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.78	□□□□□ -0.52	2e-30	■■■□□ 18.1
PABPN1-208	ENST00000557702	WDR18	Q9BV38	432 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	IVNS1ABP	Q9Y6Y0	642 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	RFX7	Q2KHR2	1363 aa		11.78	□□□□□ -0.52
PABPN1-208	ENST00000557702	ERC2	O15083	957 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	SEPT4	O43236	478 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	PQBP1	O60828	265 aa	Known RBP	11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	SLC5A1	P13866	664 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	FGFR2	P21802	821 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	LRRC41	Q15345	812 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	RAB30	Q15771	203 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	SLF2	Q8IX21	1173 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	MICALL1	Q8N3F8	863 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	NPLOC4	Q8TAT6	608 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	HERVK_113	Q902F9	699 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	GNL3L	Q9NVN8	582 aa	Known RBP	11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	RABGAP1	Q9Y3P9	1069 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	GAK	O14976	1311 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	SALL1	Q9NSC2	1324 aa		11.77	□□□□□ -0.53
PABPN1-208	ENST00000557702	BTD	P43251	543 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	GRB14	Q14449	540 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	RRP1B	Q14684	758 aa	Known RBP	11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	NCBP3	Q53F19	620 aa	Known RBP	11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	SLC44A5	Q8NCS7	719 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	LPIN2	Q92539	896 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	FAM163A	Q96GL9	167 aa	Predicted RBP	11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	SUCLG2	Q96I99	432 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	SLC28A3	Q9HAS3	691 aa		11.76	□□□□□ -0.53
PABPN1-208	ENST00000557702	PLXNA1	Q9UIW2	1896 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	PRR33	A8MZF0	331 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	USP17L10	C9JJH3	530 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	PI4K2B	G5E9Z4	385 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	NPM3	O75607	178 aa	Known RBP	11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	TIMP1	P01033	207 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	ASNS	P08243	561 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	PPIG	Q13427	754 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	2e-13	■■■□□ 17.4
PABPN1-208	ENST00000557702	TMEM240	Q5SV17	173 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	OLFML2B	Q68BL8	750 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	DPP9	Q86TI2	863 aa		11.75	□□□□□ -0.53
PABPN1-208	ENST00000557702	DZIP1	Q86YF9	867 aa	Known RBP	11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms