RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
TRAV33-201ENST00000557514 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
TRAV33-201ENST00000557514 GTF3C2Q8WUA4 911 aaPredicted RBP12.97□□□□□ -0.33
TRAV33-201ENST00000557514 ASB2Q96Q27 587 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 UHRF1Q96T88 793 aaPredicted RBP12.97□□□□□ -0.33
TRAV33-201ENST00000557514 AS3MTQ9HBK9 375 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 GNL3LQ9NVN8 582 aaKnown RBP12.97□□□□□ -0.33
TRAV33-201ENST00000557514 FLRT1Q9NZU1 646 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 DENND2AQ9ULE3 1009 aa12.97□□□□□ -0.33
TRAV33-201ENST00000557514 MROH7-TTC4A0A0A0MT08 1334 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 IGHA2P01877 340 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 HOXC6P09630 235 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 PHKA1P46020 1223 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 Q3C1V9 767 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
TRAV33-201ENST00000557514 TMOD4Q9NZQ9 345 aa12.96□□□□□ -0.33
TRAV33-201ENST00000557514 ARIH1Q9Y4X5 557 aaPredicted RBP12.96□□□□□ -0.33
TRAV33-201ENST00000557514 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
TRAV33-201ENST00000557514 CYBAP13498 195 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
TRAV33-201ENST00000557514 EPHB4P54760 987 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
TRAV33-201ENST00000557514 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 C1orf53Q5VUE5 145 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 SLC39A5Q6ZMH5 540 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
TRAV33-201ENST00000557514 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
TRAV33-201ENST00000557514 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
TRAV33-201ENST00000557514 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 ITGB8P26012 769 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
TRAV33-201ENST00000557514 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
TRAV33-201ENST00000557514 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 EDC3Q96F86 508 aaKnown RBP12.94□□□□□ -0.34
TRAV33-201ENST00000557514 PAGR1Q9BTK6 254 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 ZNF576Q9H609 170 aa12.94□□□□□ -0.34
TRAV33-201ENST00000557514 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
TRAV33-201ENST00000557514 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 ASNSP08243 561 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 CNGA1P29973 690 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 CYP2C19P33261 490 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
TRAV33-201ENST00000557514 GRB14Q14449 540 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 ARRDC4Q8NCT1 418 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 TIFAQ96CG3 184 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
TRAV33-201ENST00000557514 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 AK9Q5TCS8 1911 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 CNMDO75829 334 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
TRAV33-201ENST00000557514 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
TRAV33-201ENST00000557514 PTPREP23469 700 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 JAG1P78504 1218 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
TRAV33-201ENST00000557514 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.91□□□□□ -0.34
TRAV33-201ENST00000557514 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.91□□□□□ -0.34
TRAV33-201ENST00000557514 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 CIAO1O76071 339 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 CCNA1P78396 465 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 MECOMQ03112 1051 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 TLE2Q04725 743 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
TRAV33-201ENST00000557514 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 GAS2L1Q99501 681 aaPredicted RBP12.91□□□□□ -0.34
TRAV33-201ENST00000557514 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
TRAV33-201ENST00000557514 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
TRAV33-201ENST00000557514 SEPT4O43236 478 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 CLTBP09497 229 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 ADORA1P30542 326 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
TRAV33-201ENST00000557514 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
TRAV33-201ENST00000557514 C12orf42Q96LP6 360 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 HCN4Q9Y3Q4 1203 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
TRAV33-201ENST00000557514 REV3LO60673 3130 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 ADCYAP1R1P41586 468 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 FPGSQ05932 587 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 METTL16Q86W50 562 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms