RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 KDM4AO75164 1064 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 ASNSP08243 561 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 RASA1P20936 1047 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
ABCD4-223ENST00000555904 SART3Q15020 963 aaKnown RBP14.77□□□□□ -0.05
ABCD4-223ENST00000555904 PPP4R3BQ5MIZ7 849 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 IQCA1Q86XH1 822 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 ANKRD13AQ8IZ07 590 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 RASEFQ8IZ41 740 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 KCNB2Q92953 911 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 KLRG1Q96E93 195 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 UBAC1Q9BSL1 405 aa14.77□□□□□ -0.05
ABCD4-223ENST00000555904 PAPPA2Q9BXP8 1791 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 PASKQ96RG2 1323 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 ERICH2A1L162 156 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 USP2O75604 605 aaPredicted RBP14.76□□□□□ -0.05
ABCD4-223ENST00000555904 GDF11O95390 407 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 CASTP20810 708 aaKnown RBP14.76□□□□□ -0.05
ABCD4-223ENST00000555904 MCM5P33992 734 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 CAP2P40123 477 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 MAP3K9P80192 1104 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 TFAP4Q01664 338 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 BLOC1S2Q6QNY1 142 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 STOX1Q6ZVD7 989 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 TMEM179Q6ZVK1 233 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 INCENPQ9NQS7 918 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 GINM1Q9NU53 330 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 TAF6LQ9Y6J9 622 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 SIPA1L1O43166 1804 aa14.76□□□□□ -0.05
ABCD4-223ENST00000555904 UNCXA6NJT0 531 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 PHF20L1A8MW92 1017 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 GH2P01242 217 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 SLURP2P0DP57 97 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 FGD1P98174 961 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 FMR1Q06787 632 aaKnown RBP eCLIP14.75□□□□□ -0.05
ABCD4-223ENST00000555904 RAB3GAP1Q15042 981 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 MAP3K11Q16584 847 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 CCDC178Q5BJE1 867 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 SCYL3Q8IZE3 742 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.75□□□□□ -0.05
ABCD4-223ENST00000555904 ZNF112Q9UJU3 913 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 CYP46A1Q9Y6A2 500 aa14.75□□□□□ -0.05
ABCD4-223ENST00000555904 AKR1B1P15121 316 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 INPP5BP32019 993 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 VGLL4Q14135 290 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 ADCK5Q3MIX3 580 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 NOL9Q5SY16 702 aaKnown RBP14.74□□□□□ -0.05
ABCD4-223ENST00000555904 NEDD1Q8NHV4 660 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 ZKSCAN4Q969J2 545 aaPredicted RBP14.74□□□□□ -0.05
ABCD4-223ENST00000555904 TM6SF1Q9BZW5 370 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 KANSL2Q9H9L4 492 aa14.74□□□□□ -0.05
ABCD4-223ENST00000555904 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
ABCD4-223ENST00000555904 PLIN4Q96Q06 1357 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 PRC1O43663 620 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 ICA1Q05084 483 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 CST9Q5W186 159 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 RUFY3Q7L099 469 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 DHX32Q7L7V1 743 aaKnown RBP14.73□□□□□ -0.05
ABCD4-223ENST00000555904 MB21D2Q8IYB1 491 aaPredicted RBP14.73□□□□□ -0.05
ABCD4-223ENST00000555904 TMEM87BQ96K49 555 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 ZSCAN10Q96SZ4 725 aaPredicted RBP14.73□□□□□ -0.05
ABCD4-223ENST00000555904 SH2D4AQ9H788 454 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 AS3MTQ9HBK9 375 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 ZSWIM5Q9P217 1185 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 ABT1Q9ULW3 272 aaKnown RBP14.73□□□□□ -0.05
ABCD4-223ENST00000555904 STX8Q9UNK0 236 aa14.73□□□□□ -0.05
ABCD4-223ENST00000555904 WDR19Q8NEZ3 1342 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 USP17L5A8MUK1 530 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 UBE2Q2LH0YL09 131 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 IFIT3O14879 490 aaKnown RBP14.72□□□□□ -0.05
ABCD4-223ENST00000555904 RPS6KB1P23443 525 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 HUNKP57058 714 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 SEPT2Q15019 361 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 MOB2Q70IA6 237 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 SLC10A4Q96EP9 437 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 MTA3Q9BTC8 594 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
ABCD4-223ENST00000555904 ARHGEF10LQ9HCE6 1279 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 TCP11L1Q9NUJ3 509 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 TACC3Q9Y6A5 838 aa14.72□□□□□ -0.05
ABCD4-223ENST00000555904 POLR2AP24928 1970 aaKnown RBP14.72□□□□□ -0.05
ABCD4-223ENST00000555904 TNKSO95271 1327 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 TTLL1O95922 423 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 RRP1BQ14684 758 aaKnown RBP14.71□□□□□ -0.05
ABCD4-223ENST00000555904 RABEP1Q15276 862 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.71□□□□□ -0.05
ABCD4-223ENST00000555904 CYB5R4Q7L1T6 521 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 IL17RAQ96F46 866 aa14.71□□□□□ -0.05
ABCD4-223ENST00000555904 CEP95Q96GE4 821 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms