RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 MASTLQ96GX5 879 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF496Q96IT1 587 aaPredicted RBP9.42□□□□□ -0.9
LINC00641-201ENST00000555379 TMX3Q96JJ7 454 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CUEDC2Q9H467 287 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 RFX7Q2KHR2 1363 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
LINC00641-201ENST00000555379 RPS6KB1P23443 525 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 TFDP1Q14186 410 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CEP120Q8N960 986 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
LINC00641-201ENST00000555379 CDC42BPAQ5VT25 1732 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 SLU7O95391 586 aaKnown RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 DMTNQ08495 405 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 ZMAT2Q96NC0 199 aaKnown RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 FAM184BQ9ULE4 1060 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 RGL2O15211 777 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 KRT86O43790 486 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 KIF1CO43896 1103 aaKnown RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC175P0C221 793 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 NOP2P46087 812 aaKnown RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 DAAM2Q86T65 1068 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 CNGA4Q8IV77 575 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 FBXO40Q9UH90 709 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 METP08581 1390 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 ABCC4O15439 1325 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 MYCNP04198 464 aaPredicted RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 LMAN1P49257 510 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 NRBP2Q9NSY0 501 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
LINC00641-201ENST00000555379 IQCA1LA6NCM1 817 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 TRAPPC10P48553 1259 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 SSH3Q8TE77 659 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 TTC14Q96N46 770 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 USP40Q9NVE5 1235 aa9.41□□□□□ -0.9
LINC00641-201ENST00000555379 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 GPAA1O43292 621 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF189O75820 626 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 HOXD10P28358 340 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF165P49910 485 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 AKNAD1Q5T1N1 836 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 FERMT3Q86UX7 667 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 IFT122Q9HBG6 1241 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 SPATS2LQ9NUQ6 558 aaKnown RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 DNM3Q9UQ16 869 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 IFFO1Q0D2I5 559 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 ZBTB17Q13105 803 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 CRB1P82279 1406 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 CETN3O15182 167 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 FOXP4Q8IVH2 680 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 CCDC50Q8IVM0 306 aa9.4□□□□□ -0.9
LINC00641-201ENST00000555379 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 NOC2LQ9Y3T9 749 aaKnown RBP9.4□□□□□ -0.9
LINC00641-201ENST00000555379 CRKLP46109 303 aaKnown RBP9.4□□□□□ -0.91
LINC00641-201ENST00000555379 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.91
LINC00641-201ENST00000555379 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.91
LINC00641-201ENST00000555379 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.91
LINC00641-201ENST00000555379 ADPGKQ9BRR6 497 aa9.4□□□□□ -0.91
LINC00641-201ENST00000555379 PUF60Q9UHX1 559 aaKnown RBP9.4□□□□□ -0.91
LINC00641-201ENST00000555379 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 TRPC3Q13507 836 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 GIMAP8Q8ND71 665 aaPredicted RBP9.39□□□□□ -0.91
LINC00641-201ENST00000555379 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 CFAP57Q96MR6 1250 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 CDHR2Q9BYE9 1310 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 ANXA1P04083 346 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 SERPINB2P05120 415 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 CCT6AP40227 531 aaKnown RBP9.39□□□□□ -0.91
LINC00641-201ENST00000555379 ALCAMQ13740 583 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 PPP2R5EQ16537 467 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 SH2D4BQ5SQS7 431 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 POLR2MP0CAP2 368 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 SKIDA1Q1XH10 827 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
LINC00641-201ENST00000555379 SPECC1LQ69YQ0 1117 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
LINC00641-201ENST00000555379 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms