RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 GJB1P08034 283 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 HOXA7P31268 230 aaPredicted RBP10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 USP5P45974 858 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 TTC6Q86TZ1 520 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 TMOD4Q9NZQ9 345 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 SERPINB13Q9UIV8 391 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 PALD1Q9ULE6 856 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 DOCK3Q8IZD9 2030 aa10.95□□□□□ -0.66
AC004828.1-201ENST00000555303 PLXNB2O15031 1838 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 ADCY3O60266 1144 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 CCL5P13501 91 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 GJA8P48165 433 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 FLT3LGP49771 235 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 DYNLL1P63167 89 aaKnown RBP10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 MTMR2Q13614 643 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 TATDN1Q6P1N9 297 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 ANKRD13CQ8N6S4 541 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 MIGA1Q8NAN2 632 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 SHISA4Q96DD7 197 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 IL1RAPL2Q9NP60 686 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 MORF4L1Q9UBU8 362 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 RCAN3Q9UKA8 241 aa10.94□□□□□ -0.66
AC004828.1-201ENST00000555303 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 MTFR1Q15390 333 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 C12orf42Q96LP6 360 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 RNF208Q9H0X6 261 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 ANTXR1Q9H6X2 564 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 SAP30BPQ9UHR5 308 aaKnown RBP10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
AC004828.1-201ENST00000555303 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 GDF11O95390 407 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 MYCP01106 439 aaPredicted RBP10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 PDE6AP16499 860 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 USP14P54578 494 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 HERVK_113P62684 666 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 SLC9C2Q5TAH2 1124 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 USP17L2Q6R6M4 530 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
AC004828.1-201ENST00000555303 GOLIM4O00461 696 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 GH2P01242 217 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 HMGCRP04035 888 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 INHAP05111 366 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 U2AF1L4Q8WU68 220 aaKnown RBP10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 SOCS4Q8WXH5 440 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 KIAA1683Q9H0B3 1180 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 PAK6Q9NQU5 681 aaPredicted RBP10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 PAG1Q9NWQ8 432 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
AC004828.1-201ENST00000555303 ZNF532Q9HCE3 1301 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 SGPL1O95470 568 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 ELNP15502 786 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 ATP5JP18859 108 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 MAPK4P31152 587 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 JAG1P78504 1218 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 GPRC5AQ8NFJ5 357 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 DNAJC2Q99543 621 aaKnown RBP10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 FEZ1Q99689 392 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 UNC93B1Q9H1C4 597 aa10.9□□□□□ -0.66
AC004828.1-201ENST00000555303 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 ZNF236Q9UL36 1845 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L15C9J2P7 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L13C9JLJ4 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L11C9JVI0 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L18D6R9N7 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L22D6RA61 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L17D6RBQ6 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L19D6RCP7 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L20D6RJB6 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 APBB1O00213 710 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 XRCC5P13010 732 aaKnown RBP10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 SHMT1P34896 483 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 ERVK-24P63145 666 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 GABPAQ06546 454 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 USP17L24Q0WX57 530 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 LBX2Q6XYB7 198 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms