RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 MYH2Q9UKX2 1941 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 RBBP6Q7Z6E9 1792 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 A0A1B0GUL7 405 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 PPP1R3GB7ZBB8 358 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 BCRP11274 1271 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 FLT3LGP49771 235 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 FKBP1CQ5VVH2 108 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 DZIP1Q86YF9 867 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 ANKRD13CQ8N6S4 541 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 MRIQ9BWK5 157 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 AFG3L2Q9Y4W6 797 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 DNAH12Q6ZR08 3092 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 DOCK3Q8IZD9 2030 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 MAST3O60307 1309 aa8.49□□□□□ -1.05
PRPF40B-214ENST00000551320 PNMA6EA0A0J9YXQ4 647 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 SRGAP3O43295 1099 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 ADCY3O60266 1144 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 PRSS12P56730 875 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 RHBDL3P58872 404 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 TRMT2AQ8IZ69 625 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 SCYL3Q8IZE3 742 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 SH3RF3Q8TEJ3 882 aaPredicted RBP8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 FRAT1Q92837 279 aaPredicted RBP8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 DEFB118Q96PH6 123 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 PICK1Q9NRD5 415 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 DENND2AQ9ULE3 1009 aa8.48□□□□□ -1.05
PRPF40B-214ENST00000551320 A0A0G2JLL6 359 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 CIAO1O76071 339 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 INHAP05111 366 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 RARSP54136 660 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 HMGCS2P54868 508 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 PDE4DQ08499 809 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 SPP2Q13103 211 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 NOL9Q5SY16 702 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 PRRT2Q7Z6L0 340 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 ADGRA1Q86SQ6 560 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 U2AF1L4Q8WU68 220 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 GCC1Q96CN9 775 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 RAI14Q9P0K7 980 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 SAP30BPQ9UHR5 308 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 SUGT1Q9Y2Z0 365 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 GAKO14976 1311 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 RFX7Q2KHR2 1363 aa8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 RPAP1Q9BWH6 1393 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-214ENST00000551320 TNPO2O14787 897 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 FARP2O94887 1054 aaPredicted RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 GDF11O95390 407 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 TFRCP02786 760 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 SYN1P17600 705 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 MCAMP43121 646 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 PSEN2P49810 448 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 FCGRTP55899 365 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 DYNLL1P63167 89 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 ARHGEF6Q15052 776 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 UBE2Q1Q7Z7E8 422 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 MAPKAPK5Q8IW41 473 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 TTC13Q8NBP0 860 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 LRCH3Q96II8 777 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 PAWRQ96IZ0 340 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 PARK7Q99497 189 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 IDI2Q9BXS1 227 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 COPRSQ9NQ92 184 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 TLR7Q9NYK1 1049 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 STAP2Q9UGK3 403 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 ZMYND8Q9ULU4 1186 aaPredicted RBP8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 MROH7-TTC4A0A0A0MT08 1334 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 SALL1Q9NSC2 1324 aa8.46□□□□□ -1.06
PRPF40B-214ENST00000551320 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 DOCK2Q92608 1830 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 MGAMO43451 1857 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 CXCL11O14625 94 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 ENTPD3O75355 529 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 GJB1P08034 283 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 TRIM27P14373 513 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 GJA8P48165 433 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 GORABQ5T7V8 394 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 POTEEQ6S8J3 1075 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 SPATA5Q8NB90 893 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 SMCR8Q8TEV9 937 aaPredicted RBP8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 NSUN4Q96CB9 384 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 HOOK2Q96ED9 719 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
PRPF40B-214ENST00000551320 AATFQ9NY61 560 aaKnown RBP eCLIP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms