RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 PXYLP1Q8TE99 480 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 DEFB118Q96PH6 123 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 WDR18Q9BV38 432 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 TXNRD2Q9NNW7 524 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 MYH8P13535 1937 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 DDX60LQ5H9U9 1706 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 FARP2O94887 1054 aaPredicted RBP14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 BACE1P56817 501 aa14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 Q3C1V9 767 aa14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 NKX2-3Q8TAU0 364 aa14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 PAK6Q9NQU5 681 aaPredicted RBP14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 PNMA3Q9UL41 463 aa14.14□□□□□ -0.15
PRPF40B-212ENST00000551111 PLCG2P16885 1265 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 FOXP4Q8IVH2 680 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 MAGEB6Q8N7X4 407 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 COA7Q96BR5 231 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 FRMPD3Q5JV73 1810 aa14.13□□□□□ -0.15
PRPF40B-212ENST00000551111 MYH7P12883 1935 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 RLFQ13129 1914 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 GH2P01242 217 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 TFRCP02786 760 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 ASNSP08243 561 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 CRISPLD2Q9H0B8 497 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 MORF4L1Q9UBU8 362 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
PRPF40B-212ENST00000551111 ZNFX1Q9P2E3 1918 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 CYP2B6P20813 491 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 HERVK_113P62684 666 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 SLFNL1Q499Z3 407 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 DNAH12Q6ZR08 3092 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 AACSQ86V21 672 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 PAWRQ96IZ0 340 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 TBC1D2Q9BYX2 928 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 PORCNQ9H237 461 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 PRO3102Q9H379 93 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
PRPF40B-212ENST00000551111 USP17L10C9JJH3 530 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 APBB1O00213 710 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 PLCD1P51178 756 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 IRX3P78415 501 aaPredicted RBP14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 PABPC4Q13310 644 aaKnown RBP eCLIP14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 ZYXQ15942 572 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 ACER1Q8TDN7 264 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 TRIB2Q92519 343 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 EDC3Q96F86 508 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 RIOK1Q9BRS2 568 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 TMOD4Q9NZQ9 345 aa14.1□□□□□ -0.15
PRPF40B-212ENST00000551111 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 USP5P45974 858 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 CCL14Q16627 93 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 TATDN1Q6P1N9 297 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 HTATIP2Q9BUP3 242 aa14.09□□□□□ -0.15
PRPF40B-212ENST00000551111 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
PRPF40B-212ENST00000551111 CNMDO75829 334 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 HMGCRP04035 888 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 CHGBP05060 677 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 GUCY1A2P33402 732 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 SHMT1P34896 483 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 USP6NLQ92738 828 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 PAGR1Q9BTK6 254 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
PRPF40B-212ENST00000551111 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 ERVK-9P63128 1117 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 ERVK-24P63145 666 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 RAB3GAP1Q15042 981 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 SERPINB13Q9UIV8 391 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
PRPF40B-212ENST00000551111 TCRBV5S4A2TA0A5A2 114 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 EVI5O60447 810 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 CYP2D6P10635 497 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 PDE6AP16499 860 aa14.06□□□□□ -0.16
PRPF40B-212ENST00000551111 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms