RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 GJA5P36382 358 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 CDK8P49336 464 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 CERKLQ49MI3 558 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 IL25Q9H293 177 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 PTPRAP18433 802 aa19.34■□□□□ 0.69
CHMP1A-209ENST00000550872 PPATQ06203 517 aa19.34■□□□□ 0.69
CHMP1A-209ENST00000550872 PPARAQ07869 468 aa19.34■□□□□ 0.69
CHMP1A-209ENST00000550872 C16orf86Q6ZW13 317 aa19.34■□□□□ 0.69
CHMP1A-209ENST00000550872 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
CHMP1A-209ENST00000550872 SGSM2O43147 1006 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 CDC45O75419 566 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 SLC3A2P08195 630 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 ASNSP08243 561 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 MAP2K1Q02750 393 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 PPIL2Q13356 520 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 CCDC84Q86UT8 332 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 DSCC1Q9BVC3 393 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 CABP5Q9NP86 173 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 GINM1Q9NU53 330 aa19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-209ENST00000550872 IRF6O14896 467 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 GH2P01242 217 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 JAG1P78504 1218 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 CASC1Q6TDU7 716 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 ZBTB21Q9ULJ3 1066 aa19.32■□□□□ 0.68
CHMP1A-209ENST00000550872 DOCK1Q14185 1865 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 MANSC4A6NHS7 340 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 USP17L5A8MUK1 530 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 MPHOSPH10O00566 681 aaKnown RBP19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 ESYT1Q9BSJ8 1104 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 ZNF287Q9HBT7 754 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 ROBO3Q96MS0 1386 aa19.31■□□□□ 0.68
CHMP1A-209ENST00000550872 ZMYM6O95789 1325 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 GTF2A2P52657 109 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 PDE4BQ07343 736 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 SREBF2Q12772 1141 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 KIAA1211Q6ZU35 1233 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 CTNNA3Q9UI47 895 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
CHMP1A-209ENST00000550872 CXCL11O14625 94 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 PRDM1O75626 825 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 AKR1B1P15121 316 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 INHBEP58166 350 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 HAND2P61296 217 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 PTH1RQ03431 593 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 MS4A4AQ96JQ5 239 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 AS3MTQ9HBK9 375 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 ANAPC4Q9UJX5 808 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 KCNH4Q9UQ05 1017 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
CHMP1A-209ENST00000550872 ATAD5Q96QE3 1844 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 CCL15-CCL14A0A0B4J2E2 113 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 TRIM75PA6NK02 468 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 CETPP11597 493 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 RASA1P20936 1047 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 TM4SF4P48230 202 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 SPP2Q13103 211 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 CCL15Q16663 113 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 LAMB1P07942 1786 aa19.28■□□□□ 0.68
CHMP1A-209ENST00000550872 MYH8P13535 1937 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 ZNF213O14771 459 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 LBX1P52954 281 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 SEPT2Q15019 361 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 TMEM179Q6ZVK1 233 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 BEGAINQ9BUH8 593 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 WDR18Q9BV38 432 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 INCENPQ9NQS7 918 aa19.27■□□□□ 0.68
CHMP1A-209ENST00000550872 TESPA1A2RU30 521 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 GUCY1A2P33402 732 aa19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 BRI3BPQ8WY22 251 aa19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 TOMM22Q9NS69 142 aa19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-209ENST00000550872 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
CHMP1A-209ENST00000550872 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-209ENST00000550872 ANO2Q9NQ90 1003 aa19.25■□□□□ 0.67
CHMP1A-209ENST00000550872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHMP1A-209ENST00000550872 TACC3Q9Y6A5 838 aa19.25■□□□□ 0.67
CHMP1A-209ENST00000550872 PHIPQ8WWQ0 1821 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 USP17L10C9JJH3 530 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 RRP12Q5JTH9 1297 aaKnown RBP19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 OTUD7BQ6GQQ9 843 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 MAP4K1Q92918 833 aa19.24■□□□□ 0.67
CHMP1A-209ENST00000550872 PTPN18Q99952 460 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms