RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 IRX2Q9BZI1 471 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 ST7Q9NRC1 585 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 USP17L8P0C7I0 530 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 FGFR2P21802 821 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 TEX35Q5T0J7 233 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 MAP3K14Q99558 947 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 RASGRP2Q7LDG7 609 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 TXNRD3Q86VQ6 643 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 SLC44A5Q8NCS7 719 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 CCDC150Q8NCX0 1101 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 SYMPKQ92797 1274 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 KCPQ6ZWJ8 1503 aa15.61■□□□□ 0.09
PRPF40B-209ENST00000548825 F8W031 263 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 ZPR1O75312 459 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 RBM6P78332 1123 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 MTF1Q14872 753 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 ARHGAP29Q52LW3 1261 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 RESP18Q5W5W9 173 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 ZSCAN10Q96SZ4 725 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 BRMS1Q9HCU9 246 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 MRC1P22897 1456 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 RILPL1Q5EBL4 403 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 TBC1D9BQ66K14 1250 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 CARD6Q9BX69 1037 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 VPS16Q9H269 839 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 ERVV-1B6SEH8 477 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 SLU7O95391 586 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 CDC25BP30305 580 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
PRPF40B-209ENST00000548825 CBFA2T2O43439 604 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 KRT2P35908 639 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 LIFRP42702 1097 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 ATP2B2Q01814 1243 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 PTGDRQ13258 359 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 TEX33O43247 280 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 SGMS1Q86VZ5 419 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 UBXN4Q92575 508 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 EP400Q96L91 3159 aa15.59■□□□□ 0.09
PRPF40B-209ENST00000548825 POLR3GO15318 223 aaPredicted RBP15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 PPP6R2O75170 966 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 MECOMQ03112 1051 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 NLRP3Q96P20 1036 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 CTNND2Q9UQB3 1225 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 UTRNP46939 3433 aa15.58■□□□□ 0.09
PRPF40B-209ENST00000548825 NTSR2O95665 410 aa15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 GNAT2P19087 354 aa15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 RRAGBQ5VZM2 374 aa15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 BAG1Q99933 345 aaPredicted RBP15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 PPFIBP1Q86W92 1011 aa15.58■□□□□ 0.08
PRPF40B-209ENST00000548825 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 GTF2F1P35269 517 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 RPS8P62241 208 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 KMT5BQ4FZB7 885 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 TOGARAM2Q6ZUX3 1019 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 MAPKAPK5Q8IW41 473 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 STAG1Q8WVM7 1258 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 FBXO2Q9UK22 296 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 ABCC12Q96J65 1359 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 BCL9O00512 1426 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 A0A087X0B3 334 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 PP2D1A8MPX8 630 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 TFAP4Q01664 338 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 PUF60Q9UHX1 559 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-209ENST00000548825 CCDC12Q8WUD4 166 aaPredicted RBP15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 CEP131Q9UPN4 1083 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 KIF1AQ12756 1690 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 A0A0U1RQJ8 604 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 TTC38Q5R3I4 469 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 ATRIPQ8WXE1 791 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 SOWAHDA6NJG2 315 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 PTPREP23469 700 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 CTR9Q6PD62 1173 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 TMTC2Q8N394 836 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 TGFBRAP1Q8WUH2 860 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 CCDC34Q96HJ3 373 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 KAT14Q9H8E8 782 aa15.56■□□□□ 0.08
PRPF40B-209ENST00000548825 SEC31AO94979 1220 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms