RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
TROAP-203ENST00000546735 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
TROAP-203ENST00000546735 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
TROAP-203ENST00000546735 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
TROAP-203ENST00000546735 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
TROAP-203ENST00000546735 MGAMO43451 1857 aa17.41■□□□□ 0.38
TROAP-203ENST00000546735 CLASRPQ8N2M8 674 aaKnown RBP17.41■□□□□ 0.38
TROAP-203ENST00000546735 COA7Q96BR5 231 aa17.41■□□□□ 0.38
TROAP-203ENST00000546735 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
TROAP-203ENST00000546735 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
TROAP-203ENST00000546735 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
TROAP-203ENST00000546735 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
TROAP-203ENST00000546735 FOCADQ5VW36 1801 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 GH2P01242 217 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 INHAP05111 366 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 GJB1P08034 283 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 GJA8P48165 433 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
TROAP-203ENST00000546735 C20orf194Q5TEA3 1177 aa17.4■□□□□ 0.38
TROAP-203ENST00000546735 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
TROAP-203ENST00000546735 P2RX7Q99572 595 aaKnown RBP17.4■□□□□ 0.38
TROAP-203ENST00000546735 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
TROAP-203ENST00000546735 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 GOLIM4O00461 696 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 HMMRO75330 724 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
TROAP-203ENST00000546735 PDE6AP16499 860 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 IRX3P78415 501 aaPredicted RBP17.39■□□□□ 0.37
TROAP-203ENST00000546735 EVX2Q03828 476 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 IRF5Q13568 498 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 SLC9C2Q5TAH2 1124 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 PXYLP1Q8TE99 480 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 U2AF1L4Q8WU68 220 aaKnown RBP17.39■□□□□ 0.37
TROAP-203ENST00000546735 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
TROAP-203ENST00000546735 C19orf81C9J6K1 198 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 PLCD1P51178 756 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
TROAP-203ENST00000546735 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 CERS3Q8IU89 383 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 SERPINB13Q9UIV8 391 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
TROAP-203ENST00000546735 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
TROAP-203ENST00000546735 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
TROAP-203ENST00000546735 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 HABP4Q5JVS0 413 aaKnown RBP17.37■□□□□ 0.37
TROAP-203ENST00000546735 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
TROAP-203ENST00000546735 EHD4Q9H223 541 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
TROAP-203ENST00000546735 H0YGN5 161 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 RAB11FIP3O75154 756 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 SGPL1O95470 568 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 POLR3DP05423 398 aaPredicted RBP17.36■□□□□ 0.37
TROAP-203ENST00000546735 SHMT1P34896 483 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 HERVK_113P62684 666 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
TROAP-203ENST00000546735 LCORLQ8N3X6 602 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 SDR42E1Q8WUS8 393 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 DEFB118Q96PH6 123 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 GJD2Q9UKL4 321 aa17.36■□□□□ 0.37
TROAP-203ENST00000546735 MYH1P12882 1939 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 TCRBV5S4A2TA0A5A2 114 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 CHGBP05060 677 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 TRIM32Q13049 653 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 ABCB5Q2M3G0 1257 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 Q3C1V9 767 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 POTEEQ6S8J3 1075 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 UBE2Q1Q7Z7E8 422 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 ACER1Q8TDN7 264 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 DPF3Q92784 378 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 FEZ1Q99689 392 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 PAGR1Q9BTK6 254 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 RBPJLQ9UBG7 517 aa17.35■□□□□ 0.37
TROAP-203ENST00000546735 SMARCA5O60264 1052 aaPredicted RBP17.34■□□□□ 0.37
TROAP-203ENST00000546735 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
TROAP-203ENST00000546735 CYP2D6P10635 497 aa17.34■□□□□ 0.37
TROAP-203ENST00000546735 CYP2B6P20813 491 aa17.34■□□□□ 0.37
TROAP-203ENST00000546735 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
TROAP-203ENST00000546735 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
TROAP-203ENST00000546735 CRNKL1Q9BZJ0 848 aaKnown RBP17.34■□□□□ 0.37
TROAP-203ENST00000546735 ARMT1Q9H993 441 aa17.34■□□□□ 0.37
TROAP-203ENST00000546735 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
TROAP-203ENST00000546735 PRKAB2O43741 272 aa17.33■□□□□ 0.36
TROAP-203ENST00000546735 TFRCP02786 760 aaKnown RBP17.33■□□□□ 0.36
TROAP-203ENST00000546735 PORCNQ9H237 461 aa17.33■□□□□ 0.36
TROAP-203ENST00000546735 CABP5Q9NP86 173 aa17.33■□□□□ 0.36
TROAP-203ENST00000546735 PAK6Q9NQU5 681 aaPredicted RBP17.33■□□□□ 0.36
TROAP-203ENST00000546735 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
TROAP-203ENST00000546735 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 HMGCRP04035 888 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 ATP5JP18859 108 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms