RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 CDKL5O76039 1030 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
DDB1-224ENST00000545894 TRIM65Q6PJ69 517 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 UBXN4Q92575 508 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
DDB1-224ENST00000545894 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
DDB1-224ENST00000545894 GPAA1O43292 621 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 TRDNQ13061 729 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 PTPAQ15257 358 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
DDB1-224ENST00000545894 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
DDB1-224ENST00000545894 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
DDB1-224ENST00000545894 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 ZAP70P43403 619 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■□□□□ 11
DDB1-224ENST00000545894 PNOCQ13519 176 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
DDB1-224ENST00000545894 SCARF1Q14162 830 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 KRT40Q6A162 431 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
DDB1-224ENST00000545894 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 MYH3P11055 1940 aa13.16□□□□□ -0.3
DDB1-224ENST00000545894 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 PNMA6AP0CW24 399 aaPredicted RBP13.15□□□□□ -0.3
DDB1-224ENST00000545894 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
DDB1-224ENST00000545894 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 CUTAO60888 179 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 LRP5O75197 1615 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 BBOX1O75936 387 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
DDB1-224ENST00000545894 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
DDB1-224ENST00000545894 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
DDB1-224ENST00000545894 EFCAB8A8MWE9 144 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
DDB1-224ENST00000545894 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 TADA3O75528 432 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDB1-224ENST00000545894 TPM1P09493 284 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 KRBA2Q6ZNG9 492 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
DDB1-224ENST00000545894 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■□□□□ 10.9
DDB1-224ENST00000545894 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
DDB1-224ENST00000545894 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
DDB1-224ENST00000545894 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 TMEM232C9JQI7 657 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
DDB1-224ENST00000545894 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 CNNM1Q9NRU3 951 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 TAF1P21675 1872 aa13.14□□□□□ -0.31
DDB1-224ENST00000545894 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 FANCGO15287 622 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 TRIM29Q14134 588 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 APOA5Q6Q788 366 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 PI16Q6UXB8 463 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 TBC1D10CQ8IV04 446 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
DDB1-224ENST00000545894 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 CDC27P30260 824 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
DDB1-224ENST00000545894 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
DDB1-224ENST00000545894 ELOA2Q8IYF1 753 aaPredicted RBP13.13□□□□□ -0.31
DDB1-224ENST00000545894 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 PHKBQ93100 1093 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDB1-224ENST00000545894 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
DDB1-224ENST00000545894 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms