RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
CHEK1-218ENST00000544373 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
CHEK1-218ENST00000544373 SLC45A1Q9Y2W3 748 aa12.99□□□□□ -0.33
CHEK1-218ENST00000544373 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
CHEK1-218ENST00000544373 OSBPP22059 807 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 RRP1P56182 461 aaKnown RBP12.98□□□□□ -0.33
CHEK1-218ENST00000544373 MTMR2Q13614 643 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 TMED8Q6PL24 325 aaPredicted RBP12.98□□□□□ -0.33
CHEK1-218ENST00000544373 CERS3Q8IU89 383 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 ZBTB21Q9ULJ3 1066 aa12.98□□□□□ -0.33
CHEK1-218ENST00000544373 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 PRKAB2O43741 272 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 GH2P01242 217 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 ASNSP08243 561 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 ADD2P35612 726 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 BACE1P56817 501 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 SLC9C1Q4G0N8 1177 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
CHEK1-218ENST00000544373 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
CHEK1-218ENST00000544373 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
CHEK1-218ENST00000544373 CYP2D6P10635 497 aa12.96□□□□□ -0.33
CHEK1-218ENST00000544373 ANKRD13CQ8N6S4 541 aa12.96□□□□□ -0.33
CHEK1-218ENST00000544373 EHD4Q9H223 541 aa12.96□□□□□ -0.33
CHEK1-218ENST00000544373 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
CHEK1-218ENST00000544373 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
CHEK1-218ENST00000544373 SMIM22K7EJ46 135 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 PEX10O60683 326 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 GNRH1P01148 92 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.34
CHEK1-218ENST00000544373 SHMT1P34896 483 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 PRKCZQ05513 592 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 TTC6Q86TZ1 520 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 CRBNQ96SW2 442 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.34
CHEK1-218ENST00000544373 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.34
CHEK1-218ENST00000544373 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.34
CHEK1-218ENST00000544373 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 GABRQQ9UN88 632 aa12.96□□□□□ -0.34
CHEK1-218ENST00000544373 MBD4O95243 580 aa12.95□□□□□ -0.34
CHEK1-218ENST00000544373 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
CHEK1-218ENST00000544373 GABPAQ06546 454 aa12.95□□□□□ -0.34
CHEK1-218ENST00000544373 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
CHEK1-218ENST00000544373 P2RX7Q99572 595 aaKnown RBP12.95□□□□□ -0.34
CHEK1-218ENST00000544373 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
CHEK1-218ENST00000544373 CDK5RAP2Q96SN8 1893 aa12.95□□□□□ -0.34
CHEK1-218ENST00000544373 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 USP17L10C9JJH3 530 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 PRMT2P55345 433 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 FCGRTP55899 365 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 MTFR1Q15390 333 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
CHEK1-218ENST00000544373 NBPF11Q86T75 865 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 RAET1EQ8TD07 263 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 DYNLL2Q96FJ2 89 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
CHEK1-218ENST00000544373 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
CHEK1-218ENST00000544373 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 HOXD10P28358 340 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 RAB3GAP1Q15042 981 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 UBE3CQ15386 1083 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 ZYXQ15942 572 aaKnown RBP12.93□□□□□ -0.34
CHEK1-218ENST00000544373 ABCB5Q2M3G0 1257 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 ACER1Q8TDN7 264 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 TMOD4Q9NZQ9 345 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 PTPRFP10586 1907 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 FOCADQ5VW36 1801 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 C19orf81C9J6K1 198 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 HOXA7P31268 230 aaPredicted RBP12.93□□□□□ -0.34
CHEK1-218ENST00000544373 GRK4P32298 578 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 FLT3LGP49771 235 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHEK1-218ENST00000544373 TXNRD2Q9NNW7 524 aa12.93□□□□□ -0.34
CHEK1-218ENST00000544373 TNPO2O14787 897 aaKnown RBP12.92□□□□□ -0.34
CHEK1-218ENST00000544373 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHEK1-218ENST00000544373 SEPT2Q15019 361 aa12.92□□□□□ -0.34
CHEK1-218ENST00000544373 FAM110CQ1W6H9 321 aa12.92□□□□□ -0.34
CHEK1-218ENST00000544373 ELNP15502 786 aa12.91□□□□□ -0.34
CHEK1-218ENST00000544373 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-218ENST00000544373 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-218ENST00000544373 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
CHEK1-218ENST00000544373 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
CHEK1-218ENST00000544373 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
CHEK1-218ENST00000544373 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
CHEK1-218ENST00000544373 USP17L21D6R901 530 aa12.9□□□□□ -0.34
CHEK1-218ENST00000544373 HERVK_113P62684 666 aa12.9□□□□□ -0.34
CHEK1-218ENST00000544373 Q3C1V9 767 aa12.9□□□□□ -0.34
CHEK1-218ENST00000544373 USP17L2Q6R6M4 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms