RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CUL9Q8IWT3 2517 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 TRIB2Q92519 343 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 UBE2OQ9C0C9 1292 aaKnown RBP14.55□□□□□ -0.08
GABPB1-206ENST00000543881 TLR7Q9NYK1 1049 aaKnown RBP14.55□□□□□ -0.08
GABPB1-206ENST00000543881 LRP2BPQ9P2M1 347 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
GABPB1-206ENST00000543881 CYP2E1P05181 493 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-206ENST00000543881 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
GABPB1-206ENST00000543881 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
GABPB1-206ENST00000543881 EAF2Q96CJ1 260 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-206ENST00000543881 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
GABPB1-206ENST00000543881 PFASO15067 1338 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 CYP2B6P20813 491 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 CAP2P40123 477 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 SH3D19Q5HYK7 790 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 MAP3K21Q5TCX8 1036 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 ADGRA1Q86SQ6 560 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 SH3RF3Q8TEJ3 882 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-206ENST00000543881 ZNF512BQ96KM6 892 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-206ENST00000543881 CCDC8Q9H0W5 538 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-206ENST00000543881 MORF4L1Q9UBU8 362 aa14.53□□□□□ -0.08
GABPB1-206ENST00000543881 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 USP17L5A8MUK1 530 aa14.52□□□□□ -0.08
GABPB1-206ENST00000543881 MAP4K4O95819 1239 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 ZAP70P43403 619 aa14.52□□□□□ -0.08
GABPB1-206ENST00000543881 RRP1BQ14684 758 aaKnown RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 PIH1D3Q9NQM4 214 aaKnown RBP14.52□□□□□ -0.08
GABPB1-206ENST00000543881 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
GABPB1-206ENST00000543881 TEX11Q8IYF3 940 aa14.51□□□□□ -0.09
GABPB1-206ENST00000543881 NUDT12Q9BQG2 462 aa14.51□□□□□ -0.09
GABPB1-206ENST00000543881 AS3MTQ9HBK9 375 aa14.51□□□□□ -0.09
GABPB1-206ENST00000543881 AATFQ9NY61 560 aaKnown RBP eCLIP14.51□□□□□ -0.093e-7■■■□□ 15.6
GABPB1-206ENST00000543881 EXOC6BQ9Y2D4 811 aa14.51□□□□□ -0.09
GABPB1-206ENST00000543881 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
GABPB1-206ENST00000543881 PEX10O60683 326 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 XRCC5P13010 732 aaKnown RBP14.5□□□□□ -0.09
GABPB1-206ENST00000543881 PPP4CP60510 307 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 SOCS4Q8WXH5 440 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 COL25A1Q9BXS0 654 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-206ENST00000543881 NDUFB9Q9Y6M9 179 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 UNC80Q8N2C7 3258 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 COL6A1P12109 1028 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 CACNB2Q08289 660 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-206ENST00000543881 MTMR2Q13614 643 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 P2RX7Q99572 595 aaKnown RBP14.5□□□□□ -0.09
GABPB1-206ENST00000543881 TXNRD2Q9NNW7 524 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 TMOD4Q9NZQ9 345 aa14.5□□□□□ -0.09
GABPB1-206ENST00000543881 HERC5Q9UII4 1024 aaKnown RBP14.5□□□□□ -0.09
GABPB1-206ENST00000543881 SIPA1L1O43166 1804 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 ZKSCAN1P17029 563 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-206ENST00000543881 HOXA7P31268 230 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-206ENST00000543881 BACE1P56817 501 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 HERVK_113P62684 666 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 MDM2Q00987 491 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-206ENST00000543881 PDE3AQ14432 1141 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 LRRC26Q2I0M4 334 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 TRMT44Q8IYL2 757 aaKnown RBP14.49□□□□□ -0.09
GABPB1-206ENST00000543881 TGFBRAP1Q8WUH2 860 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 WDR18Q9BV38 432 aa14.49□□□□□ -0.09
GABPB1-206ENST00000543881 BAG3O95817 575 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-206ENST00000543881 MAPK4P31152 587 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
GABPB1-206ENST00000543881 LHX8Q68G74 356 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 MAPKAPK5Q8IW41 473 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
GABPB1-206ENST00000543881 SIRT2Q8IXJ6 389 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 NOL10Q9BSC4 688 aaKnown RBP14.48□□□□□ -0.09
GABPB1-206ENST00000543881 ANTXR1Q9H6X2 564 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 CDK5RAP2Q96SN8 1893 aa14.48□□□□□ -0.09
GABPB1-206ENST00000543881 FLT1P17948 1338 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 JAG1P78504 1218 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 CCL14Q16627 93 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 AACSQ86V21 672 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 CCAR1Q8IX12 1150 aaKnown RBP14.47□□□□□ -0.09
GABPB1-206ENST00000543881 USP6NLQ92738 828 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 DNAJC18Q9H819 358 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 IL1RAPL2Q9NP60 686 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 RBPJLQ9UBG7 517 aa14.47□□□□□ -0.09
GABPB1-206ENST00000543881 FOCADQ5VW36 1801 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 C19orf81C9J6K1 198 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 ASNSP08243 561 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 PLCG2P16885 1265 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 CYP7A1P22680 504 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 RGS2P41220 211 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 ERVK-24P63145 666 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 Q3C1V9 767 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 FAM109BQ6ICB4 259 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-206ENST00000543881 GPR142Q7Z601 462 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 METTL16Q86W50 562 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms