RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
VARS2-212ENST00000542001 FAM107BQ9H098 131 aa18.21■□□□□ 0.51
VARS2-212ENST00000542001 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
VARS2-212ENST00000542001 TCP10Q12799 353 aa18.21■□□□□ 0.51
VARS2-212ENST00000542001 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
VARS2-212ENST00000542001 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
VARS2-212ENST00000542001 KIF28PB7ZC32 967 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 CCNT1O60563 726 aaKnown RBP18.2■□□□□ 0.5
VARS2-212ENST00000542001 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 INF2Q27J81 1249 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 ERO1AQ96HE7 468 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 LUC7L2Q9Y383 392 aaKnown RBP18.2■□□□□ 0.5
VARS2-212ENST00000542001 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
VARS2-212ENST00000542001 PTPROQ16827 1216 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 ODF2Q5BJF6 829 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE15A4D2H0 777 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE8P0CG41 777 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 TBC1D8BQ0IIM8 1120 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 HLTFQ14527 1009 aaKnown RBP eCLIP18.2■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE6Q86UF2 777 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE4Q8IX94 777 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
VARS2-212ENST00000542001 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
VARS2-212ENST00000542001 PDE4DQ08499 809 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 UBE3CQ15386 1083 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.19■□□□□ 0.5
VARS2-212ENST00000542001 RAB34Q9BZG1 259 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 KCNF1Q9H3M0 494 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 NEDD4P46934 1319 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE9A4FU28 777 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 NMT2O60551 498 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 DIXDC1Q155Q3 683 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 ZC3H12CQ9C0D7 883 aaKnown RBP18.19■□□□□ 0.5
VARS2-212ENST00000542001 MROH1Q8NDA8 1641 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
VARS2-212ENST00000542001 PLS1Q14651 629 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 OXER1Q8TDS5 423 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 SYMPKQ92797 1274 aaKnown RBP18.19■□□□□ 0.5
VARS2-212ENST00000542001 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
VARS2-212ENST00000542001 BCCIPQ9P287 314 aaKnown RBP eCLIP18.19■□□□□ 0.5
VARS2-212ENST00000542001 ADGRL3Q9HAR2 1447 aa18.19■□□□□ 0.5
VARS2-212ENST00000542001 TMEM232C9JQI7 657 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CIAO1O76071 339 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CALM1P0DP23 149 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CALM2P0DP24 149 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CALM3P0DP25 149 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CALML3P27482 149 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CCDC122Q5T0U0 273 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
VARS2-212ENST00000542001 TSG101Q99816 390 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 VWDEQ8N2E2 1590 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CNBD1Q8NA66 436 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 MLKLQ8NB16 471 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 DYNLL2Q96FJ2 89 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 PKD2L1Q9P0L9 805 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
VARS2-212ENST00000542001 AP5Z1O43299 807 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 USO1O60763 962 aaKnown RBP18.18■□□□□ 0.5
VARS2-212ENST00000542001 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
VARS2-212ENST00000542001 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 TAF4BQ92750 862 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CCDC42Q96M95 316 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 GOLGA6L9A6NEM1 432 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 SYCP1Q15431 976 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 SPECC1LQ69YQ0 1117 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 CTAGE1Q96RT6 745 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 EPC1Q9H2F5 836 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
VARS2-212ENST00000542001 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 PLEKHA8P1O95397 391 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 CYP2D6P10635 497 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 TAX1BP1Q86VP1 789 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
VARS2-212ENST00000542001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■■□□□ 13.1
VARS2-212ENST00000542001 BMP15O95972 392 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 AMPD3Q01432 767 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 CSGALNACT2Q8N6G5 542 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 RMND1Q9NWS8 449 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 PAFAH1B1P43034 410 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 WWC2Q6AWC2 1192 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
VARS2-212ENST00000542001 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
VARS2-212ENST00000542001 CWC15Q9P013 229 aaKnown RBP18.17■□□□□ 0.5
VARS2-212ENST00000542001 KCNQ2O43526 872 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 WDHD1O75717 1129 aaPredicted RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 USP17L8P0C7I0 530 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 ST3GAL1Q11201 340 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 VPS18Q9P253 973 aa18.16■□□□□ 0.5
VARS2-212ENST00000542001 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 RRP36Q96EU6 259 aaKnown RBP18.16■□□□□ 0.5
VARS2-212ENST00000542001 SRRTQ9BXP5 876 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms