RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 C12orf60Q5U649 245 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 PPIP5K2O43314 1243 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 PLCD1P51178 756 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 KIAA0825Q8IV33 1275 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 GOLGA8AA7E2F4 631 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 AP5Z1O43299 807 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 NMT2O60551 498 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 SLC3A2P08195 630 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLPTM1-202ENST00000541297 FLT1P17948 1338 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 FOCADQ5VW36 1801 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 FGRP09769 529 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 PDE4BQ07343 736 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 PICALMQ13492 652 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 FUCA2Q9BTY2 467 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 PLCG2P16885 1265 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 ENAHQ8N8S7 591 aaPredicted RBP17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
CLPTM1-202ENST00000541297 POLD1P28340 1107 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 SEC23AQ15436 765 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 SLC44A5Q8NCS7 719 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 PHKBQ93100 1093 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 IQCA1Q86XH1 822 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 PCDHAC2Q9Y5I4 1007 aa17.72■□□□□ 0.43
CLPTM1-202ENST00000541297 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 DACT2Q5SW24 774 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 STRIP1Q5VSL9 837 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 CERS3Q8IU89 383 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 CHMP4CQ96CF2 233 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 GJB4Q9NTQ9 266 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 DDX60LQ5H9U9 1706 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 ORC4O43929 436 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 SUPT20HQ8NEM7 779 aa17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
CLPTM1-202ENST00000541297 YDJCA8MPS7 323 aa17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 TEKT1Q969V4 418 aa17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 KCNF1Q9H3M0 494 aa17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 MKNK2Q9HBH9 465 aa17.71■□□□□ 0.42
CLPTM1-202ENST00000541297 PDIA4P13667 645 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 PYCARDQ9ULZ3 195 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 CRKP46108 304 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 RBM5P52756 815 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 CBX1P83916 185 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 KIAA1524Q8TCG1 905 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 AIFM3Q96NN9 605 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
CLPTM1-202ENST00000541297 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 TFAP4Q01664 338 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 SPC24Q8NBT2 197 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 MTA3Q9BTC8 594 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 NTRK3Q16288 839 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 RTN1Q16799 776 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 PPP4R3BQ5MIZ7 849 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 UPF1Q92900 1129 aaKnown RBP eCLIP17.69■□□□□ 0.425e-12■■■■■ 62.3
CLPTM1-202ENST00000541297 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
CLPTM1-202ENST00000541297 APOBEC3HQ6NTF7 200 aaKnown RBP17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 ROBO3Q96MS0 1386 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 MYH15Q9Y2K3 1946 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 RESTQ13127 1097 aa17.68■□□□□ 0.42
CLPTM1-202ENST00000541297 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms