RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 FOXP1Q9H334 677 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-205ENST00000539661 WWC3Q9ULE0 1092 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 CEP131Q9UPN4 1083 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 SRPRBQ9Y5M8 271 aaKnown RBP19.99■□□□□ 0.79
RAB40C-205ENST00000539661 GLI3P10071 1580 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 NID2Q14112 1375 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 N4BP1O75113 896 aaKnown RBP19.98■□□□□ 0.79
RAB40C-205ENST00000539661 MMP1P03956 469 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 CDKAL1Q5VV42 579 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 TBC1D10CQ8IV04 446 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 CTCFLQ8NI51 663 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-205ENST00000539661 IGDCC4Q8TDY8 1250 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 YY1AP1Q9H869 796 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 FAM217BQ9NTX9 383 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-205ENST00000539661 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 STRCP1A6NGW2 1772 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 ZAP70P43403 619 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 TOB1P50616 345 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-205ENST00000539661 SPECC1Q5M775 1068 aa19.98■□□□□ 0.79
RAB40C-205ENST00000539661 PUS3Q9BZE2 481 aaKnown RBP19.98■□□□□ 0.79
RAB40C-205ENST00000539661 MCM3P25205 808 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 LIFRP42702 1097 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 AARSP49588 968 aaKnown RBP eCLIP19.97■□□□□ 0.793e-8■■■■■ 29.1
RAB40C-205ENST00000539661 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 RHOXF2BP0C7M4 288 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 IFNAR1P17181 557 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 ADORA1P30542 326 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 PLCD3Q8N3E9 789 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 RHOXF2Q9BQY4 288 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 LY9Q9HBG7 655 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 SYNRGQ9UMZ2 1314 aa19.97■□□□□ 0.79
RAB40C-205ENST00000539661 RXRAP19793 462 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 CORO7P57737 925 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 TTC31Q49AM3 519 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-205ENST00000539661 NFXL1Q6ZNB6 911 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 PPM1EQ8WY54 764 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 CUL4BQ13620 913 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 ICE2Q659A1 982 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 LRRC31Q6UY01 552 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 SLC26A6Q9BXS9 759 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 SUGCTQ9HAC7 445 aa19.96■□□□□ 0.79
RAB40C-205ENST00000539661 BTBD18B2RXH4 712 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 EIF3CLB5ME19 914 aaKnown RBP19.95■□□□□ 0.78
RAB40C-205ENST00000539661 ADD2P35612 726 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 GRIN1Q05586 938 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 DIS3L2Q8IYB7 885 aaKnown RBP19.95■□□□□ 0.78
RAB40C-205ENST00000539661 EIF3CQ99613 913 aaKnown RBP19.95■□□□□ 0.78
RAB40C-205ENST00000539661 BRMS1Q9HCU9 246 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 MYO5AQ9Y4I1 1855 aaKnown RBP19.95■□□□□ 0.78
RAB40C-205ENST00000539661 A0A0U1RQJ8 604 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 CASP14P31944 242 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 SCARF1Q14162 830 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 CCDC57Q2TAC2 916 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 ATRIPQ8WXE1 791 aa19.95■□□□□ 0.78
RAB40C-205ENST00000539661 PPFIA4O75335 1185 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 GYPCP04921 128 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 AMPD2Q01433 879 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 TRIM14Q14142 442 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 HSP90AB3PQ58FF7 597 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 TMEM67Q5HYA8 995 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 CPLX3Q8WVH0 158 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 MYO6Q9UM54 1294 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 MST1RQ04912 1400 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 B4E1Z4 1266 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 MAP9Q49MG5 647 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 CYP26C1Q6V0L0 522 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 GRAMD1CQ8IYS0 662 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 CCDC148Q8NFR7 591 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 DENND2AQ9ULE3 1009 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 SLC12A7Q9Y666 1083 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 TRPM3Q9HCF6 1732 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-205ENST00000539661 LRP6O75581 1613 aa19.94■□□□□ 0.78
RAB40C-205ENST00000539661 NBPF26B4DH59 902 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 TTF1Q15361 905 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 NBPF14Q5TI25 921 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 NBPF10Q6P3W6 841 aaKnown RBP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 NBPF15Q8N660 670 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 CDC5LQ99459 802 aaKnown RBP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 FAM204AQ9H8W3 233 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 SENP2Q9HC62 589 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 LRRIQ3A6PVS8 624 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 ARHGAP25P42331 645 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 UBE3CQ15386 1083 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 FOXR1Q6PIV2 292 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 TRIM22Q8IYM9 498 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 ZNF512BQ96KM6 892 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 GSDMAQ96QA5 445 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 AATFQ9NY61 560 aaKnown RBP eCLIP19.93■□□□□ 0.78
RAB40C-205ENST00000539661 MEGF6O75095 1541 aa19.93■□□□□ 0.78
RAB40C-205ENST00000539661 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
RAB40C-205ENST00000539661 ALX1Q15699 326 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 SH3RF1Q7Z6J0 888 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 AFAP1L1Q8TED9 768 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 PKD1L3Q7Z443 1732 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 FXR1P51114 621 aaKnown RBP eCLIP19.92■□□□□ 0.78
RAB40C-205ENST00000539661 ACRBPQ8NEB7 543 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 NKX2-3Q8TAU0 364 aa19.92■□□□□ 0.78
RAB40C-205ENST00000539661 FAM107BQ9H098 131 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms