RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 MAGEB6Q8N7X4 407 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 MIGA1Q8NAN2 632 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 U2AF1L4Q8WU68 220 aaKnown RBP17.04■□□□□ 0.32
CCND1-204ENST00000539241 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
CCND1-204ENST00000539241 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
CCND1-204ENST00000539241 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
CCND1-204ENST00000539241 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
CCND1-204ENST00000539241 UBE2Q1Q7Z7E8 422 aa17.03■□□□□ 0.32
CCND1-204ENST00000539241 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
CCND1-204ENST00000539241 ZBTB21Q9ULJ3 1066 aa17.03■□□□□ 0.32
CCND1-204ENST00000539241 C19orf81C9J6K1 198 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 USP17L10C9JJH3 530 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 H0YGN5 161 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 SGPL1O95470 568 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 USP5P45974 858 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 DPF3Q92784 378 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 IL1RAPL2Q9NP60 686 aa17.02■□□□□ 0.32
CCND1-204ENST00000539241 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 TMED8Q6PL24 325 aaPredicted RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
CCND1-204ENST00000539241 P2RX7Q99572 595 aaKnown RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 HTATIP2Q9BUP3 242 aa17.01■□□□□ 0.31
CCND1-204ENST00000539241 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 MORF4L1Q9UBU8 362 aa17.01■□□□□ 0.31
CCND1-204ENST00000539241 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
CCND1-204ENST00000539241 LOC285556D6RIA3 1793 aa17.01■□□□□ 0.31
CCND1-204ENST00000539241 SIPA1L1O43166 1804 aa17■□□□□ 0.31
CCND1-204ENST00000539241 GH2P01242 217 aa17■□□□□ 0.31
CCND1-204ENST00000539241 DEFB118Q96PH6 123 aa17■□□□□ 0.31
CCND1-204ENST00000539241 PAK6Q9NQU5 681 aaPredicted RBP17■□□□□ 0.31
CCND1-204ENST00000539241 CEP290O15078 2479 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 MGAMO43451 1857 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
CCND1-204ENST00000539241 HERVK_113P62684 666 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 EHD4Q9H223 541 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 SERPINB13Q9UIV8 391 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 GJD2Q9UKL4 321 aa16.99■□□□□ 0.31
CCND1-204ENST00000539241 APBB1O00213 710 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 HMGCRP04035 888 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 CAPN2P17655 700 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
CCND1-204ENST00000539241 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 USP17L2Q6R6M4 530 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
CCND1-204ENST00000539241 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
CCND1-204ENST00000539241 KIF1BPQ96EK5 621 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 RIOK1Q9BRS2 568 aaKnown RBP16.98■□□□□ 0.31
CCND1-204ENST00000539241 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 EMILIN3Q9NT22 766 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 ATAD5Q96QE3 1844 aa16.98■□□□□ 0.31
CCND1-204ENST00000539241 PEX10O60683 326 aa16.97■□□□□ 0.31
CCND1-204ENST00000539241 HMMRO75330 724 aa16.97■□□□□ 0.31
CCND1-204ENST00000539241 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCND1-204ENST00000539241 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
CCND1-204ENST00000539241 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
CCND1-204ENST00000539241 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.315e-6■■□□□ 12.1
CCND1-204ENST00000539241 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
CCND1-204ENST00000539241 PDE6AP16499 860 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 CERKLQ49MI3 558 aaPredicted RBP16.96■□□□□ 0.31
CCND1-204ENST00000539241 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCND1-204ENST00000539241 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
CCND1-204ENST00000539241 FEZ1Q99689 392 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 RBPJLQ9UBG7 517 aa16.96■□□□□ 0.31
CCND1-204ENST00000539241 POLR3DP05423 398 aaPredicted RBP16.95■□□□□ 0.3
CCND1-204ENST00000539241 CYP2B6P20813 491 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 MAPK4P31152 587 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 PLCD1P51178 756 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 ERVK-24P63145 666 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 TRIM32Q13049 653 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
CCND1-204ENST00000539241 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 Q3C1V9 767 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 C12orf42Q96LP6 360 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
CCND1-204ENST00000539241 RPTORQ8N122 1335 aa16.95■□□□□ 0.3
CCND1-204ENST00000539241 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
CCND1-204ENST00000539241 GOLIM4O00461 696 aa16.94■□□□□ 0.3
CCND1-204ENST00000539241 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
CCND1-204ENST00000539241 SHMT1P34896 483 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms