RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 MMP1P03956 469 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 SAFBQ15424 915 aaKnown RBP eCLIP23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 C12orf60Q5U649 245 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 SASS6Q6UVJ0 657 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 RTFDC1Q9BY42 306 aaPredicted RBP23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 KINO60870 393 aaKnown RBP23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 AMOTL1Q8IY63 956 aa23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 CMTR1Q8N1G2 835 aaKnown RBP23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 FAM200AQ8TCP9 573 aa23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 TBC1D22AQ8WUA7 517 aa23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 ATP6V0A2Q9Y487 856 aa23.87■■□□□ 1.41
SMPDL3A-203ENST00000539041 NPR1P16066 1061 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 SLC39A14Q15043 492 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 CCDC82Q8N4S0 544 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 SRGNP10124 158 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 AKAP17AQ02040 695 aaKnown RBP23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 FAM47AQ5JRC9 791 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 USP25Q9UHP3 1055 aa23.86■■□□□ 1.41
SMPDL3A-203ENST00000539041 FAM205AQ6ZU69 1335 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 TSPY2A6NKD2 308 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 BTDP43251 543 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 TROAPQ12815 778 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 SLF2Q8IX21 1173 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 FMR1NBQ8N0W7 255 aaPredicted RBP23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
SMPDL3A-203ENST00000539041 PDE6BP35913 854 aa23.84■■□□□ 1.41
SMPDL3A-203ENST00000539041 ANO6Q4KMQ2 910 aa23.84■■□□□ 1.41
SMPDL3A-203ENST00000539041 MFSD14BQ5SR56 506 aa23.84■■□□□ 1.41
SMPDL3A-203ENST00000539041 TGFBRAP1Q8WUH2 860 aa23.84■■□□□ 1.41
SMPDL3A-203ENST00000539041 GPR75-ASB3A0A0A6YYF3 556 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 PRPF3O43395 683 aaKnown RBP23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 PPP6R2O75170 966 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 RXRBP28702 533 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 NOSTRINQ8IVI9 506 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 DIS3L2Q8IYB7 885 aaKnown RBP23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 FOXP1Q9H334 677 aaPredicted RBP23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 CCDC39Q9UFE4 941 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 KCNJ14Q9UNX9 436 aa23.83■■□□□ 1.41
SMPDL3A-203ENST00000539041 A0A1B0GVL5 298 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 PLCG2P16885 1265 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 ALDH1B1P30837 517 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 FUT2Q10981 343 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 PTPAQ15257 358 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 ZSCAN30Q86W11 494 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 JMYQ8N9B5 988 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 MAP3K14Q99558 947 aa23.83■■□□□ 1.4
SMPDL3A-203ENST00000539041 BTBD18B2RXH4 712 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 NMT2O60551 498 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 MMP10P09238 476 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 XBP1P17861 261 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 SLC4A8Q2Y0W8 1093 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 AXDND1Q5T1B0 1012 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 TMTC3Q6ZXV5 915 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 FAM163AQ96GL9 167 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 COA1Q9GZY4 146 aa23.82■■□□□ 1.4
SMPDL3A-203ENST00000539041 GAKO14976 1311 aa23.81■■□□□ 1.4
SMPDL3A-203ENST00000539041 PLEKHA8P1O95397 391 aa23.81■■□□□ 1.4
SMPDL3A-203ENST00000539041 CLCN1P35523 988 aa23.81■■□□□ 1.4
SMPDL3A-203ENST00000539041 CTCFLQ8NI51 663 aaPredicted RBP23.81■■□□□ 1.4
SMPDL3A-203ENST00000539041 ADCY5O95622 1261 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 CAVIN2O95810 425 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 CMA1P23946 247 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 NDUFA8P51970 172 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 CCDC178Q5BJE1 867 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 MAPKAPK5Q8IW41 473 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 TEX11Q8IYF3 940 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 MPNDQ8N594 471 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 DYNLL2Q96FJ2 89 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 CNTNAP5Q8WYK1 1306 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 RIMBP2O15034 1052 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 TFAP4Q01664 338 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 PKN1Q16512 942 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 CBX8Q9HC52 389 aa23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 BAZ2BQ9UIF8 2168 aaKnown RBP23.8■■□□□ 1.4
SMPDL3A-203ENST00000539041 ADAMTSL1Q8N6G6 1762 aa23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 WDHD1O75717 1129 aaPredicted RBP23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 MARCKSP29966 332 aaPredicted RBP23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 GTF2IP78347 998 aa23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 RCSD1Q6JBY9 416 aa23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 MKNK2Q9HBH9 465 aa23.79■■□□□ 1.4
SMPDL3A-203ENST00000539041 STX1AQ16623 288 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 DGKHQ86XP1 1220 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 ANKS1AQ92625 1134 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 SAP30BPQ9UHR5 308 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 RILPL1Q5EBL4 403 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 DNAJC25Q9H1X3 360 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 KAT14Q9H8E8 782 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 TCP11L1Q9NUJ3 509 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 SUGT1Q9Y2Z0 365 aa23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 V9GY48 417 aaPredicted RBP23.78■■□□□ 1.4
SMPDL3A-203ENST00000539041 ZNF646O15015 1829 aaPredicted RBP23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 CUTAO60888 179 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 PTMAP06454 111 aaKnown RBP23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 PFKFB1P16118 471 aa23.77■■□□□ 1.4
SMPDL3A-203ENST00000539041 MSNP26038 577 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms